Characterization of trans-splicing in Euglenoids

被引:42
作者
Frantz, C [1 ]
Ebel, C [1 ]
Paulus, F [1 ]
Imbault, P [1 ]
机构
[1] Univ Strasbourg 1, CNRS, Inst Biol Mol Plantes, F-67084 Strasbourg, France
关键词
Euglenoid; trans-splicing; spliced leader-sequence RNA; Euglena gracilis;
D O I
10.1007/s002940000116
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We have looked for trans-splicing of nuclear mRNAs in several Euglenoid species. In Cyclidiopsis acus, Phacus curvicauda, Rhabdomonas costata and Menoidium pellucidum we showed that several pre-mRNAs chosen at random are matured by a trans-splicing process: we identified SL-RNA genes whose 5' ends (SLs for spliced leader-sequences) were transferred to the 5' extremities of mRNAs. The SL-RNA genes are located on repeated DNA fragments which also encode 5S rRNA in P. curvicauda and C. acus. The potential secondary structures of SL-RNAs are compared to those previously characterized in two other Euglenoids: Euglena gracilis and Entosiphon sulcatum. In another Euglenoid species, Distigma proteus, since none of the mRNAs examined were trans-spliced, it is possible that trans-splicing does not occur. Phylogeny based on 5S rRNA sequences suggests that the species which have, or have had, chloroplasts (E. gracilis, P. curvicauda, C. acus) diverged early from the others.
引用
收藏
页码:349 / 355
页数:7
相关论文
共 30 条
[11]  
Denker JA, 1996, RNA, V2, P746
[12]  
DROUIN G, 1995, MOL BIOL EVOL, V12, P481
[13]  
Felsenstein J., 1993, PHYLIP PHYLOGENY INF
[14]   A RANDOM-PCR METHOD (RPCR) TO CONSTRUCT WHOLE CDNA LIBRARY FROM LOW AMOUNTS OF RNA [J].
FROUSSARD, P .
NUCLEIC ACIDS RESEARCH, 1992, 20 (11) :2900-2900
[15]   Structure-function analysis of the trypanosomatid spliced leader RNA [J].
Goncharov, I ;
Xu, YX ;
Zimmer, Y ;
Sherman, K ;
Michaeli, S .
NUCLEIC ACIDS RESEARCH, 1998, 26 (09) :2200-2207
[16]   Transcription of the Trypanosoma brucei spliced leader RNA gene is dependent only on the presence of upstream regulatory elements [J].
Gunzl, A ;
Ullu, E ;
Dorner, M ;
Fragoso, SP ;
Hoffmann, KF ;
Milner, JD ;
Morita, Y ;
Nguu, EK ;
Vanacova, S ;
Wunsch, S ;
Dare, AO ;
Kwon, H ;
Tschudi, C .
MOLECULAR AND BIOCHEMICAL PARASITOLOGY, 1997, 85 (01) :67-76
[17]   TRANSCRIPTION OF A NEMATODE TRANS-SPLICED LEADER RNA REQUIRES INTERNAL ELEMENTS FOR BOTH INITIATION AND 3' END-FORMATION [J].
HANNON, GJ ;
MARONEY, PA ;
AYERS, DG ;
SHAMBAUGH, JD ;
NILSEN, TW .
EMBO JOURNAL, 1990, 9 (06) :1915-1921
[18]  
Kamaishi T, 1996, J BIOCHEM-TOKYO, V120, P1095, DOI 10.1093/oxfordjournals.jbchem.a021527
[19]   IN EUGLENA, SPLICED-LEADER RNA (SL-RNA) AND 5S RIBOSOMAL-RNA GENES ARE TANDEMLY REPEATED [J].
KELLER, M ;
TESSIER, LH ;
CHAN, RL ;
WEIL, JH ;
IMBAULT, P .
NUCLEIC ACIDS RESEARCH, 1992, 20 (07) :1711-1715
[20]  
Lackey JB., 1968, BIOL EUGLENA, V1, P27