Site-specific solvation determined by intermolecular nuclear Overhauser effect-measurements and molecular dynamics

被引:19
作者
Angulo, M
Hawat, C
Hofmann, HJ
Berger, S
机构
[1] Univ Leipzig, Inst Analyt Chem, D-04103 Leipzig, Germany
[2] Univ Leipzig, Inst Biochem, D-04103 Leipzig, Germany
关键词
D O I
10.1039/b211134a
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Site-specific solvation has been determined by intermolecular NOE measurements between solvent and solute. The experimental effect is shown on the four compounds 2-butanol, L-alanyl-L-tryptophan (Ala-Trp), adenosine and the disodium salt of adenosine 5'-monophosphate (5'-AMP) in the two solvents water and dimethyl sulfoxide (DMSO). The strength of NOE transfer correlates with the average distribution of solvent molecules around the corresponding solvation sites represented by the number of solvent molecules in a first solvation sphere, which can be obtained from molecular dynamics simulations in water. Saturation transfer between exchanging protons explains some deviations from this correlation. The NOE transfer measurements provide information on specific solute-solvent interactions and contribute to a better understanding of solvation phenomena. On the basis of a distinct relationship between steric solvation hindrance and the strength of NOE transfer, the application of such measurements for conformational analysis has been demonstrated for the first time.
引用
收藏
页码:1049 / 1052
页数:4
相关论文
共 23 条
  • [1] Bagno A, 1999, CHEM-EUR J, V5, P1291, DOI 10.1002/(SICI)1521-3765(19990401)5:4<1291::AID-CHEM1291>3.0.CO
  • [2] 2-M
  • [3] Berger S, 1999, POL J CHEM, V73, P193
  • [4] CHARMM - A PROGRAM FOR MACROMOLECULAR ENERGY, MINIMIZATION, AND DYNAMICS CALCULATIONS
    BROOKS, BR
    BRUCCOLERI, RE
    OLAFSON, BD
    STATES, DJ
    SWAMINATHAN, S
    KARPLUS, M
    [J]. JOURNAL OF COMPUTATIONAL CHEMISTRY, 1983, 4 (02) : 187 - 217
  • [5] Díaz MD, 2002, CHEM-EUR J, V8, P1663, DOI 10.1002/1521-3765(20020402)8:7<1663::AID-CHEM1663>3.0.CO
  • [6] 2-P
  • [7] Preferential solvation of a tetrapeptide by trifluoroethanol as studied by intermolecular NOE
    Díaz, MD
    Berger, S
    [J]. MAGNETIC RESONANCE IN CHEMISTRY, 2001, 39 (07) : 369 - 373
  • [8] Solvation phenomena of a tetrapeptide in water/trifluoroethanol and water/ethanol mixtures: A diffusion NMR, intermolecular NOE, and molecular dynamics study
    Fioroni, M
    Diaz, MD
    Burger, K
    Berger, S
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (26) : 7737 - 7744
  • [9] HINTON JF, 1973, SOLVENT EFFECTS CHEM, V1
  • [10] Molecular dynamics study of hyaluronic acid in water
    Kaufmann, J
    Mohle, K
    Hofmann, HJ
    Arnold, K
    [J]. JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 1998, 422 : 109 - 121