REBASE: restriction enzymes and methyltransferases

被引:112
作者
Roberts, RJ [1 ]
Vincze, T [1 ]
Posfai, J [1 ]
Macelis, D [1 ]
机构
[1] New England Biolabs Inc, Beverly, MA 01915 USA
关键词
D O I
10.1093/nar/gkg069
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
REBASE contains comprehensive information about restriction enzymes, DNA methyltransferases and related proteins such as nicking enzymes, specificity subunits and control proteins. It contains published and unpublished references, recognition and cleavage sites, isoschizomers, commercial availability, crystal and sequence data. Homing endonucleases are also included. REBASE contains the most complete and up-to-date information about the methylation sensitivity of restriction endonucleases. In addition, there is extensive information about the known and putative restriction-modification (R-M) systems in more than 100 sequenced bacterial and archaeal genomes. The data is available on the web (http://rebase.neb.com/rebase/rebase.html), through ftp (ftp.neb.com) and as monthly updates via email.
引用
收藏
页码:418 / 420
页数:3
相关论文
共 6 条
[1]   SEQUENCE MOTIFS CHARACTERISTIC OF DNA[CYTOSINE-N4]METHYLTRANSFERASES - SIMILARITY TO ADENINE AND CYTOSINE-C5 DNA-METHYLASES [J].
KLIMASAUSKAS, S ;
TIMINSKAS, A ;
MENKEVICIUS, S ;
BUTKIENE, D ;
BUTKUS, V ;
JANULAITIS, A .
NUCLEIC ACIDS RESEARCH, 1989, 17 (23) :9823-9832
[2]   EFFECT OF SITE-SPECIFIC MODIFICATION ON RESTRICTION ENDONUCLEASES AND DNA MODIFICATION METHYLTRANSFERASES [J].
MCCLELLAND, M ;
NELSON, M ;
RASCHKE, E .
NUCLEIC ACIDS RESEARCH, 1994, 22 (17) :3640-3659
[3]   EFFECT OF SITE-SPECIFIC METHYLATION ON RESTRICTION ENDONUCLEASES AND DNA MODIFICATION METHYLTRANSFERASES [J].
NELSON, M ;
RASCHKE, E ;
MCCLELLAND, M .
NUCLEIC ACIDS RESEARCH, 1993, 21 (13) :3139-3154
[4]   PREDICTIVE MOTIFS DERIVED FROM CYTOSINE METHYLTRANSFERASES [J].
POSFAI, J ;
BHAGWAT, AS ;
POSFAI, G ;
ROBERTS, RJ .
NUCLEIC ACIDS RESEARCH, 1989, 17 (07) :2421-2435
[5]   REBASE - restriction enzymes and methylases [J].
Roberts, RJ ;
Macelis, D .
NUCLEIC ACIDS RESEARCH, 2001, 29 (01) :268-269
[6]   SUGGESTED NOMENCLATURE FOR BACTERIAL HOST MODIFICATION AND RESTRICTION SYSTEMS AND THEIR ENZYMES [J].
SMITH, HO ;
NATHANS, D .
JOURNAL OF MOLECULAR BIOLOGY, 1973, 81 (03) :419-423