Probing membrane protein orientation and structure using fast magic-angle-spinning solid-state NMR

被引:20
作者
Andronesi, OC
Pfeifer, JR
Al-Momani, L
Özdirekcan, S
Rijkers, DTS
Angerstein, B
Luca, S
Koert, U
Killian, JA
Baldus, M
机构
[1] Max Planck Inst Biophys Chem, Dept NMR Based Struct Biol, D-37077 Gottingen, Germany
[2] Univ Marburg, Fachbereich Chem, D-35032 Marburg, Germany
[3] Univ Utrecht, Dept Biochem & Membranes, NL-3584 CH Utrecht, Netherlands
[4] Univ Utrecht, Fac Pharm, Dept Med Chem, Inst Pharmaceut Sci, NL-3584 CA Utrecht, Netherlands
关键词
MAS; membrane proteins; NMR; solid-state; structure determination;
D O I
10.1007/s10858-004-3452-3
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
One and two-dimensional solid-state NMR experiments are discussed that permit probing local structure and overall molecular conformation of membrane-embedded polypeptides under Magic Angle Spinning. The functional dependence of a series of anisotropic recoupling schemes is analyzed using theoretical and numerical methods. These studies lead to the construction of a set of polarization dephasing or transfer units that probe local backbone conformation and overall molecular orientation within the same NMR experiment. Experimental results are shown for a randomly oriented peptide and for two model membrane-peptides reconstituted into lipid bilayers and oriented on polymer films according to a method proposed by Bechinger et al.
引用
收藏
页码:253 / 265
页数:13
相关论文
共 80 条
[21]   Gramicidin channel controversy - revisited [J].
Cross, TA ;
Arseniev, A ;
Cornell, BA ;
Davis, JH ;
Killian, JA ;
Koeppe, RE ;
Nicholson, LK ;
Separovic, F ;
Wallace, BA .
NATURE STRUCTURAL BIOLOGY, 1999, 6 (07) :610-611
[22]   SOLID-STATE NMR STRUCTURAL STUDIES OF PEPTIDES AND PROTEINS IN MEMBRANES [J].
CROSS, TA ;
OPELLA, SJ .
CURRENT OPINION IN STRUCTURAL BIOLOGY, 1994, 4 (04) :574-581
[23]  
Cross TA, 2000, CONCEPT MAGNETIC RES, V12, P55, DOI 10.1002/(SICI)1099-0534(2000)12:2<55::AID-CMR1>3.0.CO
[24]  
2-K
[25]   Protein-lipid interactions studied with designed transmembrane peptides: role of hydrophobic matching and interfacial anchoring (Review) [J].
de Planque, MRR ;
Killian, JA .
MOLECULAR MEMBRANE BIOLOGY, 2003, 20 (04) :271-284
[26]   The effects of hydrophobic mismatch between phosphatidylcholine bilayers and transmembrane α-helical peptides depend on the nature of interfacially exposed aromatic and charged residues [J].
de Planque, MRR ;
Boots, JWP ;
Rijkers, DTS ;
Liskamp, RMJ ;
Greathouse, DV ;
Killian, JA .
BIOCHEMISTRY, 2002, 41 (26) :8396-8404
[27]   Structure of Bombyx mori silk fibroin based on solid-state NMR orientational constraints and fiber diffraction unit cell parameters [J].
Demura, M ;
Minami, M ;
Asakura, T ;
Cross, TA .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1998, 120 (06) :1300-1308
[28]  
Ernst R. R., 1987, PRINCIPLES NUCL MAGN
[29]   Inter- and intramolecular distance measurements by solid-state MAS NMR: Determination of gramicidin A channel dimer structure in hydrated phospholipid bilayers [J].
Fu, RQ ;
Cotten, M ;
Cross, TA .
JOURNAL OF BIOMOLECULAR NMR, 2000, 16 (03) :261-268
[30]   Analysis of local conformation of membrane-bound and polycrystalline peptides by two-dimensional slow-spinning rotor-synchronized MAS exchange spectroscopy [J].
Gabrys, CM ;
Yang, J ;
Weliky, DP .
JOURNAL OF BIOMOLECULAR NMR, 2003, 26 (01) :49-68