Dimer formation by a "monomeric" protein

被引:59
作者
Park, C
Raines, RT
机构
[1] Univ Wisconsin, Dept Biochem, Madison, WI 53706 USA
[2] Univ Wisconsin, Dept Chem, Madison, WI 53706 USA
关键词
composite active site; dimer; domain swapping; molecular evolution; ribonuclease A;
D O I
10.1110/ps.9.10.2026
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Dimeric proteins can arise by the swapping of structural domains between monomers. The prevalence of this occurrence is unknown. Ribonuclease A (RNase A) is assumed to be a monomer near physiological conditions. Here, this hypothesis is tested and found to be imprecise. The two histidine residues (His12 and His119) in the active site of RNase A arise from two domains (S-peptide and S-protein) of the protein. The H12A and H119A variants have 10(5)-fold less ribonucleolytic activity than does the wild-type enzyme. Incubating a 1.1 mixture of the H12A and H119A variants at pH 6.5 and 65 degreesC results in a 10(3)-fold increase in ribonucleolytic activity. A large quantity of active dimer can be produced by lyophilizing a 1:1 mixture of the H12A and H119A variants from acetic acid. At pH 6.5 and 65 degreesC, the ribonucleolytic activity of this: dimer converges to that of the dimer formed by simply incubating the monomers, as expected for a monomer-dimer equilibrium. The equilibrium dissociation constant for the dimer is near 2, mM at both 65 and 37 degreesC. This value of K-d is only 20-fold greater than the concentration of RNase A in the cow pancreas, suggesting that RNase A dimers exist in vivo. The intrinsic ability of RNase A to form dimers under physiological conditions is consistent with a detailed model for the evolution of homodimeric proteins. Dimers of "monomeric" proteins could be more prevalent than is usually appreciated.
引用
收藏
页码:2026 / 2033
页数:8
相关论文
共 57 条
[11]   Evolution of oligomeric proteins - The unusual case of a dimeric ribonuclease [J].
D'Alessio, G .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1999, 266 (03) :699-708
[12]   The evolutionary transition from monomeric to oligomeric proteins: tools, the environment, hypotheses [J].
D'Alessio, G .
PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 1999, 72 (03) :271-298
[13]  
D'Alessio G, 1997, RIBONUCLEASES STRUCT, P383
[14]  
DALESSIO G, 1995, NAT STRUCT BIOL, V2, P11, DOI 10.1038/nsb0195-11
[15]   STRUCTURAL DETERMINANTS OF ENZYMATIC PROCESSIVITY [J].
DELCARDAYRE, SB ;
RAINES, RT .
BIOCHEMISTRY, 1994, 33 (20) :6031-6037
[16]   ENGINEERING RIBONUCLEASE-A - PRODUCTION, PURIFICATION AND CHARACTERIZATION OF WILD-TYPE ENZYME AND MUTANTS AT GLN11 [J].
DELCARDAYRE, SB ;
RIBO, M ;
YOKEL, EM ;
QUIRK, DJ ;
RUTTER, WJ ;
RAINES, RT .
PROTEIN ENGINEERING, 1995, 8 (03) :261-273
[17]  
DIDONATO A, 1994, J BIOL CHEM, V269, P17394
[18]  
DIDONATO A, 1995, PROTEIN SCI, V4, P1470
[19]  
ELLIS KJ, 1982, METHOD ENZYMOL, V87, P405
[20]   Coulombic forces in protein-RNA interactions: Binding and cleavage by ribonuclease A and variants at Lys7, Arg10, and Lys66 [J].
Fisher, BM ;
Ha, JH ;
Raines, RT .
BIOCHEMISTRY, 1998, 37 (35) :12121-12132