Transition path sampling study of classical rate-promoting vibrations

被引:25
作者
Antoniou, D [1 ]
Abolfath, MR [1 ]
Schwartz, SD [1 ]
机构
[1] Yeshiva Univ Albert Einstein Coll Med, Dept Biophys, Bronx, NY 10461 USA
关键词
D O I
10.1063/1.1782813
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
It is now widely accepted that there is a class of enzymatic proton transfer reactions, which proceed through quantum tunneling. In a series of papers we have argued that some experimental features of these reactions can be explained by assuming the presence of a "rate-promoting" vibration which brings donor and acceptor closer together, thus leading to rate enhancement. There has never been a study of this effect for classical systems. We used transition path sampling to study the equivalent classical problem and found a complicated dynamical behavior that cannot be captured by transition state theory. Slow promoting vibrations lead to reactive trajectories that overshoot the saddle point, but on the other hand the short period of fast oscillations allows the reactants to stay only briefly in a low-barrier regime. There is a competition between these effects, which results to an intermediate value for the frequency of the rate-promoting vibration that is optimal for enhancing the rate. (C) 2004 American Institute of Physics.
引用
收藏
页码:6442 / 6447
页数:6
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