Comprida lagoon is a shallow lagoon separated from the sea by a sand barrier. It has a brown-coloured freshwater with a high concentration of humic compounds. Its zooplankton community and limnological features were studied from March 1992 to December 1995. The lagoon was characterized by low transparency, acid water and relative constant physical-chemical features, except during sporadic marine entrances. The zooplankton, composed of holoplanktonic and meroplanktonic forms, consisted of 60 taxa. Eleven were permanent elements of the community: e.g. Bosminopsis deitersi, nauplii and copepodites of `Diaptomus' azureus. B. deitersi correlated positively with the lowest pH values and with the highest total dissolved nitrogen. Only four taxa correlated with chlorophyll-a concentration. Pigmentation in 'D.' azureus is suggested to be as an energy reserve in a system where phytoplankton is probably light-limited.