Messenger RNA turnover in eukaryotes: Pathways and enzymes

被引:285
作者
Meyer, S [1 ]
Temme, C [1 ]
Wahle, E [1 ]
机构
[1] Univ Halle Wittenberg, Inst Biochem, D-06120 Halle An Der Saale, Germany
关键词
mRNA decay; cap; poly(A) tail; regulation of gene expression;
D O I
10.1080/10409230490513991
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The control of mRNA degradation is an important component of the regulation of gene expression since the steady-state concentration of mRNA is determined both by the rates of synthesis and of decay. Two general pathways of mRNA decay have been described in eukaryotes. Both pathways share the exonucleolytic removal of the poly(A) tail (deadenylation) as the first step. In one pathway, deadenylation is followed by the hydrolysis of the cap and processive degradation of the mRNA body by a 5' exonuclease. In the second pathway, the mRNA body is degraded by a complex of 3' exonucleases before the remaining cap structure is hydrolyzed. This review discusses the proteins involved in the catalysis and control of both decay pathways.
引用
收藏
页码:197 / 216
页数:20
相关论文
共 226 条
[1]   A doughnut-shaped heteromer of human Sm-like proteins binds to the 3′-end of U6 snRNA, thereby facilitating U4/U6 duplex formation in vitro [J].
Achsel, T ;
Brahms, H ;
Kastner, B ;
Bachi, A ;
Wilm, M ;
Lührmann, R .
EMBO JOURNAL, 1999, 18 (20) :5789-5802
[2]   SELECTIVE DESTABILIZATION OF SHORT-LIVED MESSENGER-RNAS WITH THE GRANULOCYTE-MACROPHAGE COLONY-STIMULATING FACTOR AU-RICH 3' NONCODING REGION IS MEDIATED BY A COTRANSLATIONAL MECHANISM [J].
AHARON, T ;
SCHNEIDER, RJ .
MOLECULAR AND CELLULAR BIOLOGY, 1993, 13 (03) :1971-1980
[3]   Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex [J].
Albert, TK ;
Hanzawa, H ;
Legtenberg, YIA ;
de Ruwe, MJ ;
van den Heuvel, FAJ ;
Collart, MA ;
Boelens, R ;
Timmers, HTM .
EMBO JOURNAL, 2002, 21 (03) :355-364
[4]   Isolation and characterization of human orthologs of yeast CCR4-NOT complex subunits [J].
Albert, TK ;
Lemaire, M ;
van Berkum, NL ;
Gentz, R ;
Collart, MA ;
Timmers, HTM .
NUCLEIC ACIDS RESEARCH, 2000, 28 (03) :809-817
[5]   The yeast exosome and human PM-Scl are related complexes of 3′→5′ exonucleases [J].
Allmang, C ;
Petfalski, E ;
Podtelejnikov, A ;
Mann, M ;
Tollervey, D ;
Mitchell, P .
GENES & DEVELOPMENT, 1999, 13 (16) :2148-2158
[6]   A complex prediction:: three-dimensional model of the yeast exosome [J].
Aloy, P ;
Ciccarelli, FD ;
Leutwein, C ;
Gavin, AC ;
Superti-Furga, G ;
Bork, P ;
Böttcher, B ;
Russell, RB .
EMBO REPORTS, 2002, 3 (07) :628-635
[7]   The 3′ to 5′ degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3′ to 5′ exonucleases of the exosome complex [J].
Anderson, JSJ ;
Parker, R .
EMBO JOURNAL, 1998, 17 (05) :1497-1506
[8]   Ski7p G protein interacts with the exosome and the Ski complex for 3′-to-5′ mRNA decay in yeast [J].
Araki, Y ;
Takahashi, S ;
Kobayashi, T ;
Kajiho, H ;
Hoshino, S ;
Katada, T .
EMBO JOURNAL, 2001, 20 (17) :4684-4693
[9]   Substrate specificity of human methylpurine DNA N-glycosylase [J].
Asaeda, A ;
Ide, H ;
Asagoshi, K ;
Matsuyama, S ;
Tano, K ;
Murakami, A ;
Takamori, Y ;
Kubo, K .
BIOCHEMISTRY, 2000, 39 (08) :1959-1965
[10]   The RNA-binding SAM domain of Smaug defines a new family of post-transcriptional regulators [J].
Aviv, T ;
Lin, Z ;
Lau, S ;
Rendl, LM ;
Sicheri, F ;
Smibert, CA .
NATURE STRUCTURAL BIOLOGY, 2003, 10 (08) :614-621