Theoretical modeling of spectroscopic properties of molecules in solution: toward an effective dynamical discrete/continuum approach

被引:55
作者
Brancato, Giuseppe
Barone, Vincenzo
Rega, Nadia
机构
[1] Univ Naples Federico II, Dipartimento Chim, I-80126 Naples, Italy
[2] Univ Naples Federico II, INSTM, I-80126 Naples, Italy
关键词
mean field; NMR; IR; EPR; UV;
D O I
10.1007/s00214-006-0216-z
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
In this work, we present an effective and flexible computational approach, which is the result of an on-going development conducted in our group, for simulating complex solute-solvent systems and computing relevant spectroscopic observables. Such an approach is based on QM/MM molecular dynamics techniques using non-periodic conductor boundary conditions and localized basis sets, combined with a posteriori high-level quantum mechanical methods for the calculation of spectroscopic parameters. As illustrative applications, we report structural and spectroscopic analyses of acetone, acrolein and glycine radical in aqueous solutions, where solvent effects on the NMR chemical shifts, UV absorption spectrum and EPR hyperfine coupling constants, respectively, are investigated and favorably compared to experimental measurements. In particular, it will be shown the importance of including dynamical effects in order to reproduce experimental data accurately. Moreover, we present an infrared analysis of formamide in both gas phase and acetonitrile from first-principle molecular dynamics simulations.
引用
收藏
页码:1001 / 1015
页数:15
相关论文
共 85 条
[41]   Ab initio methods for the calculation of NMR shielding and indirect spin-spin coupling constants [J].
Helgaker, T ;
Jaszunski, M ;
Ruud, K .
CHEMICAL REVIEWS, 1999, 99 (01) :293-352
[42]   Interplay of electronic, environmental, and vibrational effects in determining the hyperfine coupling constants of organic free radicals [J].
Improta, R ;
Barone, V .
CHEMICAL REVIEWS, 2004, 104 (03) :1231-1253
[43]   Structure and magnetic properties of nitroxide molecular crystals by density functional calculations employing periodic boundary conditions [J].
Improta, R ;
Kudin, KN ;
Scuseria, GE ;
Barone, V .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (01) :113-120
[46]   Ab initio molecular dynamics:: Propagating the density matrix with Gaussian orbitals.: II.: Generalizations based on mass-weighting, idempotency, energy conservation and choice of initial conditions [J].
Iyengar, SS ;
Schlegel, HB ;
Millam, JM ;
Voth, GA ;
Scuseria, GE ;
Frisch, MJ .
JOURNAL OF CHEMICAL PHYSICS, 2001, 115 (22) :10291-10302
[47]  
Jackson J.D., 1999, Classical electrodynamics
[48]   Understanding NMR chemical shifts [J].
Jameson, CJ .
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, 1996, 47 :135-169
[49]   COSMO - A NEW APPROACH TO DIELECTRIC SCREENING IN SOLVENTS WITH EXPLICIT EXPRESSIONS FOR THE SCREENING ENERGY AND ITS GRADIENT [J].
KLAMT, A ;
SCHUURMANN, G .
JOURNAL OF THE CHEMICAL SOCIETY-PERKIN TRANSACTIONS 2, 1993, (05) :799-805
[50]  
KLAPPER I, 1986, Proteins Structure Function and Genetics, V1, P47, DOI 10.1002/prot.340010109