FTIR reveals structural differences between native β-sheet proteins and amyloid fibrils

被引:586
作者
Zandomeneghi, G
Krebs, MRH
Mccammon, MG
Fändrich, M
机构
[1] IMB, D-07745 Jena, Germany
[2] Univ Cambridge, Cavendish Lab, P&C Grp, Cambridge CB3 0HE, England
[3] Univ Cambridge, Dept Chem, Cambridge CB2 1EW, England
关键词
protein structure/folding; prions; aggregation; amyloid; conformational disease; infrared spectroscopy;
D O I
10.1110/ps.041024904
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The presence of beta-sheets in the core of amyloid fibrils raised questions as to whether or not beta-sheet-containing proteins, such as transthyretin, are predisposed to form such fibrils. However, we show here that the molecular structure of amyloid fibrils differs more generally from the beta-sheets in native proteins. This difference is evident from the amide I region of the infrared spectrum and relates to the distribution of the dihedral angles within the Ramachandran plot, the average number of strands per sheet, and possibly, the beta-sheet twist. These data imply that amyloid fibril formation from native beta-sheet proteins can involve a substantial structural reorganization.
引用
收藏
页码:3314 / 3321
页数:8
相关论文
共 62 条
[1]   Amyloidosis of Alzheimer's Aβ peptides:: solid-state nuclear magnetic resonance, electron paramagnetic resonance, transmission electron microscopy, scanning transmission electron microscopy and atomic force microscopy studies [J].
Antzutkin, ON .
MAGNETIC RESONANCE IN CHEMISTRY, 2004, 42 (02) :231-246
[2]   STRUCTURE OF BETA-POLY-L-ALANINE - REFINED ATOMIC CO-ORDINATES FOR AN ANTI-PARALLEL BETA-PLEATED SHEET [J].
ARNOTT, S ;
DOVER, SD ;
ELLIOTT, A .
JOURNAL OF MOLECULAR BIOLOGY, 1967, 30 (01) :201-&
[3]  
ARVINTE T, 1993, J BIOL CHEM, V268, P6415
[4]   What vibrations tell us about proteins [J].
Barth, A ;
Zscherp, C .
QUARTERLY REVIEWS OF BIOPHYSICS, 2002, 35 (04) :369-430
[5]   Synchrotron X-ray studies suggest that the core of the transthyretin amyloid fibril is a continuous beta-sheet helix [J].
Blake, C ;
Serpell, L .
STRUCTURE, 1996, 4 (08) :989-998
[6]   Instability, unfolding and aggregation of human lysozyme variants underlying amyloid fibrillogenesis [J].
Booth, DR ;
Sunde, M ;
Bellotti, V ;
Robinson, CV ;
Hutchinson, WL ;
Fraser, PE ;
Hawkins, PN ;
Dobson, CM ;
Radford, SE ;
Blake, CCF ;
Pepys, MB .
NATURE, 1997, 385 (6619) :787-793
[7]   Formation of insulin amyloid fibrils followed by FTIR simultaneously with CD and electron microscopy [J].
Bouchard, M ;
Zurdo, J ;
Nettleton, EJ ;
Dobson, CM ;
Robinson, CV .
PROTEIN SCIENCE, 2000, 9 (10) :1960-1967
[8]   2ND DERIVATIVE INFRARED-SPECTROSCOPY AS A NONDESTRUCTIVE TOOL TO ASSESS THE PURITY AND STRUCTURAL INTEGRITY OF PROTEINS [J].
BYLER, DM ;
WILSON, RM ;
RANDALL, CS ;
SOKOLOSKI, TD .
PHARMACEUTICAL RESEARCH, 1995, 12 (03) :446-450
[9]   Designing conditions for in vitro formation of amyloid protofilaments and fibrils [J].
Chiti, F ;
Webster, P ;
Taddei, N ;
Clark, A ;
Stefani, M ;
Ramponi, G ;
Dobson, CM .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (07) :3590-3594
[10]   In situ characterization of beta-amyloid in Alzheimer's diseased tissue by synchrotron Fourier transform infrared Microspectroscopy [J].
Choo, LP ;
Wetzel, DL ;
Halliday, WC ;
Jackson, M ;
LeVine, SM ;
Mantsch, HH .
BIOPHYSICAL JOURNAL, 1996, 71 (04) :1672-1679