New Sequence Variants in HLA Class II/III Region Associated with Susceptibility to Knee Osteoarthritis Identified by Genome-Wide Association Study

被引:84
作者
Nakajima, Masahiro [1 ]
Takahashi, Atsushi [2 ]
Kou, Ikuyo [1 ]
Rodriguez-Fontenla, Cristina [3 ,4 ]
Gomez-Reino, Juan J. [3 ,4 ,5 ]
Furuichi, Tatsuya [1 ]
Dai, Jin [1 ,6 ]
Sudo, Akihiro [7 ]
Uchida, Atsumasa [7 ]
Fukui, Naoshi [8 ]
Kubo, Michiaki [9 ]
Kamatani, Naoyuki [2 ]
Tsunoda, Tatsuhiko [10 ]
Malizos, Konstantinos N. [11 ,12 ]
Tsezou, Aspasia [13 ]
Gonzalez, Antonio [3 ,4 ]
Nakamura, Yusuke [14 ]
Ikegawa, Shiro [1 ]
机构
[1] RIKEN, Ctr Genom Med, Lab Bone & Joint Dis, Tokyo, Japan
[2] RIKEN, Ctr Genom Med, Lab Stat Anal, Tokyo, Japan
[3] Hosp Clin Univ Santiago, Lab Invest 10, Santiago De Compostela, Spain
[4] Hosp Clin Univ Santiago, Rheumatol Unit, Santiago De Compostela, Spain
[5] Univ Santiago de Compostela, Dept Med, Santiago De Compostela, Spain
[6] Nanjing Univ, Sch Med, Drum Tower Hosp, Ctr Diag & Treatment Joint Dis, Nanjing 210008, Peoples R China
[7] Mie Univ, Fac Med, Dept Orthopaed Surg, Tsu, Mie, Japan
[8] Natl Hosp Org Sagamihara Natl Hosp, Clin Res Ctr Rheumatol & Allergy, Dept Pathomech, Kanagawa, Japan
[9] RIKEN, Ctr Genom Med, Lab Genotyping Dev, Kanagawa, Japan
[10] RIKEN, Ctr Genom Med, Lab Med Informat, Kanagawa, Japan
[11] Univ Thessaly, Dept Orthopaed, Larisa, Greece
[12] Inst Biomed Res & Technol, Larisa, Greece
[13] Univ Thessaly, Sch Med, Dept Biol, Larisa, Greece
[14] Univ Tokyo, Inst Med Sci, Ctr Human Genome, Tokyo, Japan
来源
PLOS ONE | 2010年 / 5卷 / 03期
关键词
SINGLE-NUCLEOTIDE POLYMORPHISM; INCREASES SUSCEPTIBILITY; ARTICULAR CHONDROCYTES; OSTEO-ARTHRITIS; GENE; JAPANESE; PHENOTYPES; ANTIGENS; HLA-DQA2; BTNL2;
D O I
10.1371/journal.pone.0009723
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Osteoarthritis (OA) is a common disease that has a definite genetic component. Only a few OA susceptibility genes that have definite functional evidence and replication of association have been reported, however. Through a genome-wide association study and a replication using a total of similar to 4,800 Japanese subjects, we identified two single nucleotide polymorphisms (SNPs) (rs7775228 and rs10947262) associated with susceptibility to knee OA. The two SNPs were in a region containing HLA class II/III genes and their association reached genome-wide significance (combined P = 2.43x10(-8) for rs7775228 and 6.73x10(-8) for rs10947262). Our results suggest that immunologic mechanism is implicated in the etiology of OA.
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页数:6
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