Repair of alkylated DNA: Recent advances

被引:242
作者
Sedgwick, Barbara
Bates, Paul A.
Paik, Johanna
Jacobs, Susan C.
Lindahl, Tomas [1 ]
机构
[1] Imperial Canc Res Fund, Clare Hall Labs, Canc Res UK London Res Inst, S Mimms EN6 3LD, Herts, England
[2] Canc Res UK London Res Inst, Biomol Modelling Lab, London WC2A 3PX, England
[3] Florida State Univ, Dept Biomed Sci, Tallahassee, FL 32306 USA
关键词
AlkB; DNA dioxygenases; DNA glycosylases; 1-methyladenine; 3-methyladenine;
D O I
10.1016/j.dnarep.2006.10.005
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
cytotoxic and mutagenic methylated bases in DNA can be generated by endogenous and environmental alkylating agents. Such damaged bases are removed by three distinct strategies. The abundant toxic lesion 3-methyladenine (3-alkyladenine) is excised by a specific DNA glycosylase that initiates a base excision-repair process. The toxic lesions 1-methyladenine and 3-methylcytosine are corrected by oxidative DNA demethylation catalyzed by DNA dioxygenases. These enzymes release the methyl moiety as formaldehyde, directly reversing the base damage. The third strategy involves the mutagenic and cytotoxic lesion O-6-methylguanine which is also repaired by direct reversal but uses a different mechanism. Here, the methyl group is transferred from the lesion to a specific cysteine residue within the methyltransferase itself. In this review, we briefly describe endogenous alkylating agents and the extensively investigated DNA repair enzymes, mammalian 3-methyladenine-DNA glycosylase and O-6-methylguanine-DNA methyltransferase. We provide a more detailed description of the structures and biochemical properties of the recently discovered DNA dioxygenases. (c) 2006 Elsevier B.V. All rights reserved.
引用
收藏
页码:429 / 442
页数:14
相关论文
共 107 条
[41]   Ribonucleotide reductases [J].
Jordan, A ;
Reichard, P .
ANNUAL REVIEW OF BIOCHEMISTRY, 1998, 67 :71-98
[42]   A NEW GENE (ALKB) OF ESCHERICHIA-COLI THAT CONTROLS SENSITIVITY TO METHYL METHANE SULFONATE [J].
KATAOKA, H ;
YAMAMOTO, Y ;
SEKIGUCHI, M .
JOURNAL OF BACTERIOLOGY, 1983, 153 (03) :1301-1307
[43]   HUNG2 is the major repair enzyme for removal of uracil from U:A matches, U:G mismatches, and U in single-stranded DNA, with hSMUG1 as a broad specificity backup [J].
Kavli, B ;
Sundheim, O ;
Akbari, M ;
Otterlei, M ;
Nilsen, H ;
Skorpen, F ;
Aas, PA ;
Hagen, L ;
Krokan, HE ;
Slupphaug, G .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (42) :39926-39936
[44]   Separation of killing and tumorigenic effects of an alkylating agent in mice defective in two of the DNA repair genes [J].
Kawate, H ;
Sakumi, K ;
Tsuzuki, T ;
Nakatsuru, Y ;
Ishikawa, T ;
Takahashi, S ;
Takano, H ;
Noda, T ;
Sekiguchi, M .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (09) :5116-5120
[45]   Accumulation of premutagenic DNA lesions in mice defective in removal of oxidative base damage [J].
Klungland, A ;
Rosewell, I ;
Hollenbach, S ;
Larsen, E ;
Daly, G ;
Epe, B ;
Seeberg, E ;
Lindahl, T ;
Barnes, DE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1999, 96 (23) :13300-13305
[46]  
KOCHETKOV NK, 1972, ORGANIC CHEM NUCL B
[47]   Demethylation of 3-methylthymine in DNA by bacterial and human DNA dioxygenases [J].
Koivisto, P ;
Robins, P ;
Lindahl, T ;
Sedgwick, B .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2004, 279 (39) :40470-40474
[48]   Minimal methylated substrate and extended substrate range of Escherichia coli AlkB protein, a 1-methyladenine-DNA dioxygenase [J].
Koivisto, P ;
Duncan, T ;
Lindahl, T ;
Sedgwick, B .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2003, 278 (45) :44348-44354
[49]   High expression of a new marker PCA-1 in human prostate carcinoma [J].
Konishi, N ;
Nakamura, M ;
Ishida, E ;
Shimada, K ;
Mitsui, E ;
Yoshikawa, R ;
Yamamoto, H ;
Tsujikawa, K .
CLINICAL CANCER RESEARCH, 2005, 11 (14) :5090-5097
[50]   Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB [J].
Kurowski, MA ;
Bhagwat, AS ;
Papaj, G ;
Bujnicki, JM .
BMC GENOMICS, 2003, 4 (1)