Tests of biogeographic hypotheses for diversification in the Amazonian forest frog, Physalaemus petersi

被引:61
作者
Funk, W. Chris
Caldwell, Janalee P.
Peden, Colin E.
Padial, Jose M.
De la Riva, Ignacio
Cannatella, David C.
机构
[1] Univ Texas, Sect Integrat Biol, Austin, TX 78712 USA
[2] Univ Oklahoma, Dept Zool, Sam Noble Oklahoma Museum Nat Hist, Norman, OK 73032 USA
[3] Area Zool, Museo Hist Nat Noel Kempff Mercado, St Cruz Sierra, Bolivia
[4] CSIC, Museo Nacl Ciencias Nat, Madrid 28006, Spain
基金
美国国家科学基金会;
关键词
Physalaemus; frog; Amazon basin; mitochondrial DNA; phylogeography; speciation; population expansion;
D O I
10.1016/j.ympev.2007.01.012
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Several hypotheses have been proposed to explain the biogeographic processes that generate the high species richness of the Amazon basin. We tested two of them in a terra firme (upland) forest frog species, Physalaemus petersi: (1) the riverine barrier hypothesis; and (2) the elevational gradient hypothesis. Mitochondrial DNA sequence data (2.4 kb) from the 12S, 16S, and intervening valine tRNA genes were obtained from 65 P. petersi individuals and 4 outgroup taxa and analyzed with a combination of phylogenetic and population genetic approaches. Moderate support for the riverine barrier hypothesis was found for one of the three rivers examined, but little evidence Was found for the elevational gradient hypothesis. Phylogenetic analyses revealed that high levels of sequence divergence (an average of 4.57-4.79%) separate three well-supported clades from the northwestern, southwestern, and eastern Amazon. Strong evidence for recent population expansion in P. petersi in the southwestern region of the Amazon basin was also uncovered. (c) 2007 Elsevier Inc. All rights reserved.
引用
收藏
页码:825 / 837
页数:13
相关论文
共 84 条
[41]   Genetic divergence in the superspecies Manacus [J].
Höglund, J ;
Shorey, L .
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2004, 81 (03) :439-447
[42]  
HOORN C, 1995, GEOLOGY, V23, P237, DOI 10.1130/0091-7613(1995)023<0237:ATAACF>2.3.CO
[43]  
2
[44]  
Huelsenbeck John P., 1996, P19
[45]   A likelihood-ratio test of monophyly [J].
Huelsenbeck, JP ;
Hillis, DM ;
Nielsen, R .
SYSTEMATIC BIOLOGY, 1996, 45 (04) :546-558
[46]   MRBAYES: Bayesian inference of phylogenetic trees [J].
Huelsenbeck, JP ;
Ronquist, F .
BIOINFORMATICS, 2001, 17 (08) :754-755
[47]   A phylogeo graphically distinct and deep divergence in the widespread Neotropical turnip-tailed gecko, Thecadactylus rapicauda [J].
Kronauer, DJC ;
Bergmann, PJ ;
Mercer, JM ;
Russell, AP .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2005, 34 (02) :431-437
[48]  
Kuhner MK, 1998, GENETICS, V149, P429
[49]   Fine-scale genetic pattern and evidence for sex-biased dispersal in the tungara frog, Physalaemus pustulosus [J].
Lampert, KP ;
Rand, AS ;
Mueller, UG ;
Ryan, MJ .
MOLECULAR ECOLOGY, 2003, 12 (12) :3325-3334
[50]   Genetic footprints of demographic expansion in North America, but not Amazonia, during the Late Quaternary [J].
Lessa, EP ;
Cook, JA ;
Patton, JL .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2003, 100 (18) :10331-10334