Signalling ballet in space and time

被引:458
作者
Kholodenko, Boris N. [1 ,2 ]
Hancock, John F. [3 ]
Kolch, Walter [1 ]
机构
[1] Univ Coll Dublin, Dublin 4, Ireland
[2] Thomas Jefferson Univ, Dept Pathol Anat & Cell Biol, Philadelphia, PA 19107 USA
[3] Univ Texas Houston, Sch Med, Dept Integrat Biol & Pharmacol, Houston, TX 77030 USA
基金
美国国家卫生研究院; 爱尔兰科学基金会;
关键词
SINGLE-MOLECULE TRACKING; FUS3 MAP KINASE; GPI-ANCHORED PROTEINS; NEGATIVE-FEEDBACK; SCAFFOLD PROTEINS; LIPID RAFTS; K-RAS; SPATIAL REGULATION; CELL-SIZE; H-RAS;
D O I
10.1038/nrm2901
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Although we have amassed extensive catalogues of signalling network components, our understanding of the spatiotemporal control of emergent network structures has lagged behind. Dynamic behaviour is starting to be explored throughout the genome, but analysis of spatial behaviours is still confined to individual proteins. The challenge is to reveal how cells integrate temporal and spatial information to determine specific biological functions. Key findings are the discovery of molecular signalling machines such as Ras nanoclusters, spatial activity gradients and flexible network circuitries that involve transcriptional feedback. They reveal design principles of spatiotemporal organization that are crucial for network function and cell fate decisions.
引用
收藏
页码:414 / 426
页数:13
相关论文
共 114 条
[81]   Dual-specificity phosphatases: critical regulators with diverse cellular targets [J].
Patterson, Kate I. ;
Brummer, Tilman ;
O'Brien, Philippa M. ;
Daly, Roger J. .
BIOCHEMICAL JOURNAL, 2009, 418 :475-489
[82]   Targeting of cyclic AMP degradation to β2-adrenergic receptors by β-arrestins [J].
Perry, SJ ;
Baillie, GS ;
Kohout, TA ;
McPhee, I ;
Magiera, MM ;
Ang, KL ;
Miller, WE ;
McLean, AJ ;
Conti, M ;
Houslay, MD ;
Lefkowitz, RJ .
SCIENCE, 2002, 298 (5594) :834-836
[83]   Electrostatic interactions positively regulate K-ras nanocluster formation and function [J].
Plowman, Sarah J. ;
Ariotti, Nicholas ;
Goodall, Andrew ;
Parton, Robert G. ;
Hancock, John F. .
MOLECULAR AND CELLULAR BIOLOGY, 2008, 28 (13) :4377-4385
[84]   H-ras, K-ras, and inner plasma membrane raft proteins operate in nanoclusters with differential dependence on the actin cytoskeleton [J].
Plowman, SJ ;
Muncke, C ;
Parton, RG ;
Hancock, JF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (43) :15500-15505
[85]   Bistability and oscillations in the Huang-Ferrell model of MAPK signaling [J].
Qiao, Liang ;
Nachbar, Robert B. ;
Kevrekidis, Ioannis G. ;
Shvartsman, Stanislav Y. .
PLOS COMPUTATIONAL BIOLOGY, 2007, 3 (09) :1819-1826
[86]   A dimerization-dependent mechanism drives RAF catalytic activation [J].
Rajakulendran, Thanashan ;
Sahmi, Malha ;
Lefrancois, Martin ;
Sicheri, Frank ;
Therrien, Marc .
NATURE, 2009, 461 (7263) :542-U114
[87]   Retrograde signaling in axonal regeneration [J].
Rishal, Ida ;
Fainzilber, Mike .
EXPERIMENTAL NEUROLOGY, 2010, 223 (01) :5-10
[88]   Ca2+ transfer from the ER to mitochondria: When, how and why [J].
Rizzuto, Rosario ;
Marchi, Saverio ;
Bonora, Massimo ;
Aguiari, Paola ;
Bononi, Angela ;
De Stefani, Diego ;
Giorgi, Carlotta ;
Leo, Sara ;
Rimessi, Alessandro ;
Siviero, Roberta ;
Zecchini, Erika ;
Pinton, Paolo .
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS, 2009, 1787 (11) :1342-1351
[89]   STIM1, an essential and conserved component of store-operated Ca2+ channel function [J].
Roos, J ;
DiGregorio, PJ ;
Yeromin, AV ;
Ohlsen, K ;
Lioudyno, M ;
Zhang, SY ;
Safrina, O ;
Kozak, JA ;
Wagner, SL ;
Cahalan, MD ;
Veliçelebi, G ;
Stauderman, KA .
JOURNAL OF CELL BIOLOGY, 2005, 169 (03) :435-445
[90]   Growth factor-induced MAPK network topology shapes Erk response determining PC-12 cell fate [J].
Santos, Silvia D. M. ;
Verveer, Peter J. ;
Bastiaens, Philippe I. H. .
NATURE CELL BIOLOGY, 2007, 9 (03) :324-U139