A comparative analysis of 23 structures of the amyloidogenic protein transthyretin

被引:177
作者
Hörnberg, A
Eneqvist, T
Olofsson, A
Lundgren, E
Sauer-Eriksson, AE [1 ]
机构
[1] Umea Univ, Umea Ctr Mol Pathogenesis, S-90187 Umea, Sweden
[2] Umea Univ, Dept Cell & Mol Biol, S-90187 Umea, Sweden
关键词
transthyretin; amyloidosis; X-ray structure; structural comparison; familial amyloidotic polyneuropathy;
D O I
10.1006/jmbi.2000.4078
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Self-assembly of the human plasma protein transthyretin (TTR) into unbranched insoluble amyloid fibrils occurs as a result of point mutations that destabilize the molecule, leading to conformational changes. The tertiary structure of native soluble TTR and many of its disease-causing mutants have been determined. Several independent studies by X-ray crystallography have suggested structural differences between TTR variants which are claimed to be of significance for amyloid formation. As these changes are minor and not consistent between the studies, we have compared all TTR structures available at the protein data bank including three wild-types, three non-amyloidogenic mutants, seven amyloidogenic mutants and nine complexes. The reference for this study is a new 1.5 Angstrom resolution structure of human wild-type TTR refined to an R-factor/R-free of 18.6%/21.6%. The present findings are discussed in the light of the previous structural studies of TTR variants, and show the reported structural differences to be non-significant. (C) 2000 Academic Press.
引用
收藏
页码:649 / 669
页数:21
相关论文
共 86 条
[1]   ICM - A NEW METHOD FOR PROTEIN MODELING AND DESIGN - APPLICATIONS TO DOCKING AND STRUCTURE PREDICTION FROM THE DISTORTED NATIVE CONFORMATION [J].
ABAGYAN, R ;
TOTROV, M ;
KUZNETSOV, D .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1994, 15 (05) :488-506
[2]   THE CCP4 SUITE - PROGRAMS FOR PROTEIN CRYSTALLOGRAPHY [J].
BAILEY, S .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1994, 50 :760-763
[3]   Transthyretin amyloidosis [J].
Benson, MD ;
Uemichi, T .
AMYLOID-INTERNATIONAL JOURNAL OF EXPERIMENTAL AND CLINICAL INVESTIGATION, 1996, 3 (01) :44-56
[4]   Synchrotron X-ray studies suggest that the core of the transthyretin amyloid fibril is a continuous beta-sheet helix [J].
Blake, C ;
Serpell, L .
STRUCTURE, 1996, 4 (08) :989-998
[5]  
Blake CCF, 1996, CIBA F SYMP, V199, P6
[6]   STRUCTURE OF HUMAN PLASMA PREALBUMIN AT 2.5 A RESOLUTION - PRELIMINARY REPORT ON POLYPEPTIDE-CHAIN CONFORMATION, QUATERNARY STRUCTURE AND THYROXINE BINDING [J].
BLAKE, CCF ;
GEISOW, MJ ;
SWAN, IDA .
JOURNAL OF MOLECULAR BIOLOGY, 1974, 88 (01) :1-&
[7]  
BLAKE CCF, 1977, NATURE, V268, P115, DOI 10.1038/268115a0
[8]   STRUCTURE OF PRE-ALBUMIN - SECONDARY, TERTIARY AND QUATERNARY INTERACTIONS DETERMINED BY FOURIER REFINEMENT AT 1.8-A [J].
BLAKE, CCF ;
GEISOW, MJ ;
OATLEY, SJ ;
RERAT, B ;
RERAT, C .
JOURNAL OF MOLECULAR BIOLOGY, 1978, 121 (03) :339-356
[9]   FREE R-VALUE - A NOVEL STATISTICAL QUANTITY FOR ASSESSING THE ACCURACY OF CRYSTAL-STRUCTURES [J].
BRUNGER, AT .
NATURE, 1992, 355 (6359) :472-475
[10]   Crystallography & NMR system:: A new software suite for macromolecular structure determination [J].
Brunger, AT ;
Adams, PD ;
Clore, GM ;
DeLano, WL ;
Gros, P ;
Grosse-Kunstleve, RW ;
Jiang, JS ;
Kuszewski, J ;
Nilges, M ;
Pannu, NS ;
Read, RJ ;
Rice, LM ;
Simonson, T ;
Warren, GL .
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 1998, 54 :905-921