Streptacidiphilus gen. nov., acidophilic actinomycetes with wall chemotype I and emendation of the family Streptomycetaceae (Waksman and Henrici (1943)AL) emend. Rainey et al. 1997

被引:101
作者
Kim, SB
Lonsdale, J
Seong, CN
Goodfellow, M
机构
[1] Univ Newcastle, Dept Agr & Environm Sci, Newcastle Upon Tyne NE1 7RU, Tyne & Wear, England
[2] Suncheon Natl Univ, Dept Biol, Sunchon, South Korea
来源
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY | 2003年 / 83卷 / 02期
基金
英国生物技术与生命科学研究理事会;
关键词
acidophilic actinomycetes; family Streptomycetaceae; polyphasic taxonomy; Streptacidiphilus gen. nov;
D O I
10.1023/A:1023397724023
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The taxonomic position of acidophilic actinomycetes selectively isolated from acidic soils and litter was examined using a polyphasic approach. The distinct 16S rDNA phyletic branch formed by representative strains was equated with related monophyletic clades that corresponded to the genera Kitasatospora and Streptomyces. The acidophilic isolates also exhibited a distinctive pH profile, a unique 16S rDNA signature, and contained major amounts of LL-diaminopimelic acid, galactose and rhamnose in whole-organism hydrolysates. It is proposed that these acidophilic actinomycetes be assigned to a new genus, Streptacidiphilus gen. nov., on the basis of genotypic and phenotypic differences. Three species were defined on the basis of DNA: DNA pairing and phenotypic data, namely, Streptacidiphilus albus sp. nov., the type species, Streptacidiphilus neutrinimicus sp. nov. and Streptacidiphilus carbonis sp. nov. Members of the genera Kitasatospora, Streptacidiphilus and Streptomyces share a number of key characteristics and form a stable monophyletic branch in the 16S rDNA tree. It is, therefore, proposed that the description of the family Streptomycetaceae be emended to account for properties shown by Kitasatospora and Streptacidiphilus species.
引用
收藏
页码:107 / 116
页数:10
相关论文
共 62 条
[11]  
Goodfellow M, 1987, FRONTIERS APPL MICRO, V2, P97
[12]   INFLUENCES OF SOIL ACIDITY ON STREPTOMYCES POPULATIONS INHABITING FOREST SOILS [J].
HAGEDORN, C .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1976, 32 (03) :368-375
[13]   Actinomyces acidophilus n sp - A group of acidophilus actinomycetes isolated from the soil [J].
Jensen, HL .
SOIL SCIENCE, 1928, 25 (03) :225-236
[15]  
Jukes T. H., 1969, MAMMALIAN PROTEIN ME, P121, DOI DOI 10.1016/B978-1-4832-3211-9.50009-7
[16]   CENTRAL NOTATIONS FOR THE REVISED ISCC-NBS COLOR-NAME BLOCKS [J].
KELLY, KL .
JOURNAL OF RESEARCH OF THE NATIONAL BUREAU OF STANDARDS, 1958, 61 (05) :427-431
[17]   STUDIES ON ECOLOGY OF ACTINOMYCETES IN SOIL .8. DISTRIBUTION AND CHARACTERISTICS OF ACIDOPHILIC ACTINOMYCETES [J].
KHAN, MR ;
WILLIAMS, ST .
SOIL BIOLOGY & BIOCHEMISTRY, 1975, 7 (06) :345-348
[18]   Classification of thermophilic streptomycetes, including the description of Streptomyces thermoalcalitolerans sp. nov. [J].
Kim, B ;
Sahin, N ;
Minnikin, DE ;
Zakrzewska-Czerwinska, J ;
Mordarski, M ;
Goodfellow, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1999, 49 :7-17
[19]   Analysis of thermophilic clades within the genus Streptomyces by 16S ribosomal DNA sequence comparisons [J].
Kim, D ;
Chun, J ;
Sahin, N ;
Hah, YC ;
Goodfellow, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1996, 46 (02) :581-587
[20]   Gordonia desulfuricans sp nov., a benzothiophene-desulphurizing actinomycete [J].
Kim, SB ;
Brown, R ;
Oldfield, C ;
Gilbert, SC ;
Goodfellow, M .
INTERNATIONAL JOURNAL OF SYSTEMATIC BACTERIOLOGY, 1999, 49 :1845-1851