Estimating the number of bound waters in Gd(III) complexes revisited.: Improved methods for the prediction of q-values

被引:13
作者
Hay, BP
Werner, EJ
Raymond, KN
机构
[1] Pacific NW Nalt Lab, Div Chem Sci, Richland, WA 99352 USA
[2] Univ Calif Berkeley, Dept Chem, Berkeley, CA 94720 USA
关键词
D O I
10.1021/bc0498370
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Two literature computational methods for the prediction of the number of inner-sphere aqua ligands, q, have been applied to a test set of seven Gd(aminocarboxylate) complexes. The first method is based on the hypothesis that q should be proportional to the solvent-accessible surface area of the ligand-complexed Gd ion (Castonguay, L. A., Treasurywala, A. M., Caulfield, T. J., Jaeger, E. P., and Kellar, K. E. (1999) Prediction of q-Values and Conformations of Gadolinium Chelates for Magnetic Resonance Imaging. Bioconjugate Chem. 10, 958). The second method is based on the hypothesis that q-values can be deduced by examining series of steric energy versus ionic radii plots as a function of coordination number (Reichert, D. E., Hancock, R. D., and Welch, M. J. (1996) Molecular Mechanics Investigation of Gadolinium(III) Complexes. Inorg. Chem. 35, 7013). This study identifies deficiencies in these methods and, with respect to the first method, describes some apparent errors. Although neither method was reliable at predicting q, two alternate approaches based on either molecular mechanics strain thresholds or exposed Gd surface area thresholds are shown to predict observed q-values for all Gd aminocarboxylate complexes in the test set.
引用
收藏
页码:1496 / 1502
页数:7
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共 41 条
[21]   A molecular mechanics (MM3(96)) force field for metal-amide complexes [J].
Hay, BP ;
Clement, O ;
Sandrone, G ;
Dixon, DA .
INORGANIC CHEMISTRY, 1998, 37 (22) :5887-5894
[22]   1,3,5-TRIAMINO-1,3,5-TRIDEOXY-CIS-INOSITOL, A LIGAND WITH A REMARKABLE VERSATILITY FOR METAL-IONS .5. COMPLEX-FORMATION WITH MAGNESIUM(II), CALCIUM(II), STRONTIUM(II), BARIUM(II), AND CADMIUM(II) [J].
HEGETSCHWEILER, K ;
HANCOCK, RD ;
GHISLETTA, M ;
KRADOLFER, T ;
GRAMLICH, V ;
SCHMALLE, HW .
INORGANIC CHEMISTRY, 1993, 32 (23) :5273-5284
[23]   SYNTHESIS, CHARACTERIZATION, AND CRYSTAL-STRUCTURE OF THE GADOLINIUM(III) CHELATE OF (1R,4R,7R)-ALPHA,ALPHA',ALPHA''-TRIMETHYL-1,4,7,10-TETRAAZACYCLODODECANE-1,4,7-TRIACETIC ACID (DO3MA) [J].
KANG, SI ;
RANGANATHAN, RS ;
EMSWILER, JE ;
KUMAR, K ;
GOUGOUTAS, JZ ;
MALLEY, MF ;
TWEEDLE, MF .
INORGANIC CHEMISTRY, 1993, 32 (13) :2912-2918
[24]   PARAMAGNETIC METAL-COMPLEXES AS WATER PROTON RELAXATION AGENTS FOR NMR IMAGING - THEORY AND DESIGN [J].
LAUFFER, RB .
CHEMICAL REVIEWS, 1987, 87 (05) :901-927
[25]   MOLECULAR MECHANICS - THE MM3 FORCE-FIELD FOR HYDROCARBONS .3. THE VANDERWAALS POTENTIALS AND CRYSTAL DATA FOR ALIPHATIC AND AROMATIC-HYDROCARBONS [J].
LII, JH ;
ALLINGER, NL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (23) :8576-8582
[26]   MOLECULAR MECHANICS - THE MM3 FORCE-FIELD FOR HYDROCARBONS .2. VIBRATIONAL FREQUENCIES AND THERMODYNAMICS [J].
LII, JH ;
ALLINGER, NL .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1989, 111 (23) :8566-8575
[27]   The effect of ligand scaffold size on the stability of tripodal hydroxypyridonate gadolinium complexes [J].
O'Sullivan, B ;
Doble, DMJ ;
Thompson, MK ;
Siering, C ;
Xu, JD ;
Botta, M ;
Aime, S ;
Raymond, KN .
INORGANIC CHEMISTRY, 2003, 42 (08) :2577-2583
[28]   GEPOL - AN IMPROVED DESCRIPTION OF MOLECULAR-SURFACES .3. A NEW ALGORITHM FOR THE COMPUTATION OF A SOLVENT-EXCLUDING SURFACE [J].
PASCUALAHUIR, JL ;
SILLA, E ;
TUNON, I .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1994, 15 (10) :1127-1138
[29]   GEPOL - AN IMPROVED DESCRIPTION OF MOLECULAR-SURFACES .1. BUILDING THE SPHERICAL SURFACE SET [J].
PASCUALAHUIR, JL ;
SILLA, E .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1990, 11 (09) :1047-1060
[30]   Molecular mechanics investigation of gadolinium(III) complexes [J].
Reichert, DE ;
Hancock, RD ;
Welch, MJ .
INORGANIC CHEMISTRY, 1996, 35 (24) :7013-7020