Brownian dynamics simulations of bead-rod and bead-spring chains: numerical algorithms and coarse-graining issues

被引:158
作者
Somasi, M
Khomami, B
Woo, NJ
Hur, JS
Shaqfeh, ESG
机构
[1] Washington Univ, Dept Chem Engn, St Louis, MO 63130 USA
[2] Washington Univ, Mat Res Lab, St Louis, MO 63130 USA
[3] Stanford Univ, Sci Comp Computat Math Program, Stanford, CA USA
[4] Stanford Univ, Dept Chem & Mech Engn, Stanford, CA USA
基金
美国国家科学基金会;
关键词
Brownian dynamics; dilute polymer solution; bead-spring model; bead-rod model; shear flow; extensional flow; algorithm; coarse graining;
D O I
10.1016/S0377-0257(02)00132-5
中图分类号
O3 [力学];
学科分类号
08 ; 0801 ;
摘要
The efficiency and robustness of various numerical schemes have been evaluated by performing Brownian dynamics simulations of bead-rod and three popular nonlinear bead-spring chain models in uniaxial extension and simple. shear flow. The bead-spring models include finitely. extensible nonlinear elastic (FENE) springs, worm-like chain (WLC) springs, and Pade approximation to the inverse Langevin function, (ILC) springs. For the bead-spring chains two new predictor-corrector algorithms are proposed, which are much superior to commonly used explicit and other fully implicit schemes. In the case of bead-rod chain models, the mid-point algorithm of Liu [J. Chem. Phys. 90 (1989) 5826] is found to be computationally more efficient than a fully implicit Newton's method. Furthermore, the accuracy and computational efficiency of two different stress expressions for the bead-rod chains, namely theKramers-Kirkwood and the modified Giesekus have been evaluated under both transient and steady conditions. It is demonstrated that the Kramers-Kirkwood with stochastic filtering is the preferred choice for transient flow while the Giesekus expression is better suited for steady state calculations. The issue of coarse graining from a bead-rod chain to a bead-spring chain has also been investigated. Though bead-spring chains are shown to capture only semi-quantitatively the response of the bead-rod chains in transient flows, a systematic coarse-graining. procedure that provides the best description of bead-rod chains via bead-spring chains is presented. (C) 2002 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:227 / 255
页数:29
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