Evolution of a homopurine-homopyrimidine pentanucleotide repeat sequence upstream of the human inducible nitric oxide synthase gene

被引:68
作者
Xu, WM
Liu, LZ
Emson, PC
Harrington, CR
Charles, IG
机构
[1] Univ London Univ Coll, Rayne Inst, Cruciform Project, London WC1E 6JJ, England
[2] Babraham Inst, MRC, Mol Neurosci Grp, Dept Neurobiol, Cambridge CB2 4AT, England
[3] MRC Ctr, Cambridge Brain Lab, Cambridge CB2 2QH, England
关键词
Old World monkeys; great apes; DNA sequence; polymorphism; microsatellite;
D O I
10.1016/S0378-1119(97)00538-6
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
We have identified a highly polymorphic pentanucleotide repeat (CCTTT)n within the 5'-putative promoter region of the human inducible nitric oxide synthase gene (iNOS, NOS2). Using a pair of specific primers derived from the human iNOS gene, we have also amplified this iNOS repeat in DNA from the following species: chimpanzee, gorilla, orangutan and macaque. As is found in man, both chimpanzees and gorillas are polymorphic at this locus. In contrast, the locus is monomorphic in macaques and orangutans. While the average number of repeats is similar in gorilla and man, there are considerably fewer repeats in chimpanzees. A comparison of the sequences flanking the (CCTTT)n repeats among these closely related species demonstrates the presence of long stretches of homopurine-homopyrimidine residues. Similar polypurine/polypyrimidine stretches have been identified in the promoter regions of a number of other vertebrate genes where they have been associated with transcriptional regulation, although a role for the (CCTTT)n repeat array in the human iNOS gene has not yet been demonstrated. (C) 1997 Elsevier Science B.V.
引用
收藏
页码:165 / 170
页数:6
相关论文
共 16 条
[1]   Transcriptional regulation of human inducible nitric oxide synthase (NOS2) gene by cytokines: Initial analysis of the human NOS2 promoter [J].
deVera, ME ;
Shapiro, RA ;
Nussler, AK ;
Mudgett, JS ;
Simmons, RL ;
Morris, SM ;
Billiar, TR ;
Geller, DA .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1996, 93 (03) :1054-1059
[2]   SLIPPERY DNA RUNS ON AND ON AND ON.. [J].
DOVER, G .
NATURE GENETICS, 1995, 10 (03) :254-256
[3]  
GACY AM, 1995, CELL, V81, P533
[4]   MINISATELLITE REPEAT CODING AS A DIGITAL APPROACH TO DNA TYPING [J].
JEFFREYS, AJ ;
MACLEOD, A ;
TAMAKI, K ;
NEIL, DL ;
MONCKTON, DG .
NATURE, 1991, 354 (6350) :204-209
[5]  
LEVINSON G, 1987, MOL BIOL EVOL, V4, P203
[6]   A NOVEL GENE CONTAINING A TRINUCLEOTIDE REPEAT THAT IS EXPANDED AND UNSTABLE ON HUNTINGTONS-DISEASE CHROMOSOMES [J].
MACDONALD, ME ;
AMBROSE, CM ;
DUYAO, MP ;
MYERS, RH ;
LIN, C ;
SRINIDHI, L ;
BARNES, G ;
TAYLOR, SA ;
JAMES, M ;
GROOT, N ;
MACFARLANE, H ;
JENKINS, B ;
ANDERSON, MA ;
WEXLER, NS ;
GUSELLA, JF ;
BATES, GP ;
BAXENDALE, S ;
HUMMERICH, H ;
KIRBY, S ;
NORTH, M ;
YOUNGMAN, S ;
MOTT, R ;
ZEHETNER, G ;
SEDLACEK, Z ;
POUSTKA, A ;
FRISCHAUF, AM ;
LEHRACH, H ;
BUCKLER, AJ ;
CHURCH, D ;
DOUCETTESTAMM, L ;
ODONOVAN, MC ;
RIBARAMIREZ, L ;
SHAH, M ;
STANTON, VP ;
STROBEL, SA ;
DRATHS, KM ;
WALES, JL ;
DERVAN, P ;
HOUSMAN, DE ;
ALTHERR, M ;
SHIANG, R ;
THOMPSON, L ;
FIELDER, T ;
WASMUTH, JJ ;
TAGLE, D ;
VALDES, J ;
ELMER, L ;
ALLARD, M ;
CASTILLA, L ;
SWAROOP, M .
CELL, 1993, 72 (06) :971-983
[7]   THE LONG REPETITIVE POLYPURINE POLYPYRIMIDINE SEQUENCE (TTCCC)48 FORMS DNA TRIPLEX WITH PU-PU-PY BASE TRIPLETS INVIVO [J].
MICHEL, D ;
CHATELAIN, G ;
HERAULT, Y ;
BRUN, G .
NUCLEIC ACIDS RESEARCH, 1992, 20 (03) :439-443
[8]   DNA CONFORMATION AT THE 5' END OF THE CHICKEN ADULT BETA-GLOBIN GENE [J].
NICKOL, JM ;
FELSENFELD, G .
CELL, 1983, 35 (02) :467-477
[9]  
RAINEY P, 1993, SCIENCE, V260, P1958, DOI 10.1126/science.8316837
[10]   GENETIC-VARIATION IN PATHOGENIC BACTERIA [J].
ROBERTSON, BD ;
MEYER, TF .
TRENDS IN GENETICS, 1992, 8 (12) :422-427