Databases and software for the analysis of mutations in the human p53 gene, human hprt gene and both the lacI and lacZ gene in transgenic rodents

被引:31
作者
Cariello, NF
Douglas, GR
Gorelick, NJ
Hart, DW
Wilson, JD
Soussi, T
机构
[1] Glaxo Wellcome Inc, Med Safety Evaluat, Res Triangle Pk, NC 27709 USA
[2] Hlth Canada, Ctr Environm Hlth, Mutagenesis Sect, Ottawa, ON K1A 0L2, Canada
[3] Procter & Gamble Co, Ivorydale Tech Ctr, Cincinnati, OH 45217 USA
[4] CNRS, UMR 218, F-75248 Paris, France
关键词
D O I
10.1093/nar/26.1.198
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have created databases and software applications for the analysis of DNA mutations at the human p53 gene, the human hprt gene and both the rodent transgenic lad and lacZ loci, The databases themselves are stand-alone dBASE files and the software for analysis of the databases runs on IBM-compatible computers with Microsoft Windows, Each database has a separate software analysis program, The software created for these databases permit the filtering, ordering, report generation and display of information in the database, In addition, a significant number of routines have been developed for the analysis of single base substitutions, One method of obtaining the databases and software is via the World Wide Web, Open the following home page with a Web Browser: http://sunsite.unc.edu/dnam/mainpage.html. Alternatively, the databases and programs are available via public FTP from: anonymous@sunsite.unc.edu. There is no password required to enter the system, The databases and software are found beneath the subdirectory: pub/academic/biology/dna-mutations. Two other programs are available at the site, a program for comparison of mutational spectra and a program for entry of mutational data into a relational database.
引用
收藏
页码:198 / 199
页数:2
相关论文
共 20 条
[1]   ALTERATIONS OF THE HPRT GENE IN HUMAN INVIVO-DERIVED 6-THIOGUANINE-RESISTANT LYMPHOCYTES-T [J].
ALBERTINI, RJ ;
ONEILL, JP ;
NICKLAS, JA ;
HEINTZ, NH ;
KELLEHER, PC .
NATURE, 1985, 316 (6026) :369-371
[2]   Relational database model for DNA mutations and a software program for implementation of the model [J].
Cariello, N .
MUTATION RESEARCH-ENVIRONMENTAL MUTAGENESIS AND RELATED SUBJECTS, 1996, 359 (02) :103-117
[3]  
CARIELLO NF, 1994, NUCLEIC ACIDS RES, V22, P3549
[4]  
CARIELLO NF, 1994, CANCER RES, V54, P4454
[5]  
Cariello NF, 1996, ENVIRON MOL MUTAGEN, V28, P397, DOI 10.1002/(SICI)1098-2280(1996)28:4<397::AID-EM14>3.0.CO
[6]  
2-A
[7]   COMPUTER-PROGRAM FOR THE ANALYSIS OF MUTATIONAL SPECTRA - APPLICATION TO P53 MUTATIONS [J].
CARIELLO, NF ;
PIEGORSCH, WW ;
ADAMS, WT ;
SKOPEK, TR .
CARCINOGENESIS, 1994, 15 (10) :2281-2285
[8]   Databases and software for the analysis of mutations in the human p53 gene, the human hprt gene and the lacZ gene in transgenic rodents [J].
Cariello, NF ;
Douglas, GR ;
Soussi, T .
NUCLEIC ACIDS RESEARCH, 1996, 24 (01) :119-120
[9]   Databases and software for the analysis of mutations in the human p53 gene, the human hprt gene and both the lacI and lacZ gene in transgenic rodents [J].
Cariello, NF ;
Douglas, GR ;
Dycaico, MJ ;
Gorelick, NJ ;
Provost, GS ;
Soussi, T .
NUCLEIC ACIDS RESEARCH, 1997, 25 (01) :136-137
[10]   SOFTWARE FOR THE ANALYSIS OF MUTATIONS AT THE HUMAN HPRT GENE [J].
CARIELLO, NF .
MUTATION RESEARCH, 1994, 312 (02) :173-185