Role of a two-residue spacer in an α,β-didehydrophenylalanine containing hexapeptide:: Crystal and solution structure of Boc-Val-ΔPhe-Leu-Ala-ΔPhe-Ala-OMe

被引:12
作者
Padyana, AK
Ramakumar, S
Mathur, P
Jagannathan, NR
Chauhan, VS
机构
[1] Int Ctr Genet Engn & Biotechnol, New Delhi 110067, India
[2] Indian Inst Sci, Dept Phys, Bangalore 560012, Karnataka, India
[3] All India Inst Med Sci, Dept NMR, New Delhi 110029, India
关键词
3(10)-helix; aromatic interactions; constrained peptides; crystal and solution structure; de novo design; didehydrophenylalanine;
D O I
10.1002/psc.432
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The peptide Boc-Val(1)-DeltaPhe(2)-Leu(3)-Ala(4)-DeltaPhe(5)-Ala(6)-OMc has been examined for the structural consequence of placing a two-residue segment between the APhe residues. The peptide is stabilized by four consecutive beta-turns. The overall conformation of the molecule is a right-handed 3(10)-helix. with average (Phi, psi) values (-67.7degrees -22.7degrees), unwound at the C-terminus. The H-1 NMR results also suggest that the peptide maintains its 3(10)-helical structure in solution as observed in the crystal state, The crystal structure is stabilized through head-to-tail hydrogen bonds and a repertoire of aromatic interactions laterally directed between adjacent helices, which are antiparallel to each other, The aromatic ring of forms the hub of multicentred interactions, namely as a donor in aromatic C-H(...)pi and aromatic C-(HO)-O-...=C interactions and as an acceptor in a CH(3)(...)pi interaction, The present structure uniquely illustrates the unusual capability of a DeltaPhe ring to host such concerted interactions and suggests its exploitation in Introducing long-range interactions in the folding of supersecondary structures. Copyright (C) 2003 European Peptide Society and John Wiley Sons, Ltd.
引用
收藏
页码:54 / 63
页数:10
相关论文
共 51 条
[22]   DIFFERENCES IN THE AMINO-ACID DISTRIBUTIONS OF 310-HELICES AND ALPHA-HELICES [J].
KARPEN, ME ;
DEHASETH, PL ;
NEET, KE .
PROTEIN SCIENCE, 1992, 1 (10) :1333-1342
[23]   CONFORMATIONS OF CYCLIC PEPTIDES .4. NUCLEAR MAGNETIC RESONANCE STUDIES OF CYCLO-PENTAGLYCYL-L-LEUCYL AND CYCLO-DIGLYCYL-L-HISTIDYLDIGLYCYL-L-TYROSYL [J].
KOPPLE, KD ;
OHNISHI, M ;
GO, A .
BIOCHEMISTRY, 1969, 8 (10) :4087-&
[24]   X-H center dot center dot center dot pi(phenyl) interactions - Theoretical and crystallographic observations [J].
Malone, JF ;
Murray, CM ;
Charlton, MH ;
Docherty, R ;
Lavery, AJ .
JOURNAL OF THE CHEMICAL SOCIETY-FARADAY TRANSACTIONS, 1997, 93 (19) :3429-3436
[25]  
Noda K, 1983, PEPTIDES ANAL SYNTHE, V5, P285
[26]  
Pieroni O, 1996, BIOPOLYMERS, V38, P97, DOI 10.1002/(SICI)1097-0282(199601)38:1<97::AID-BIP8>3.0.CO
[27]  
2-R
[28]   PROTON MAGNETIC-RESONANCE STUDIES IN TRIFLUOROETHANOL - SOLVENT MIXTURES AS A MEANS OF DELINEATING PEPTIDE PROTONS [J].
PITNER, TP ;
URRY, DW .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1972, 94 (04) :1399-&
[29]  
Rajashankar KR, 1996, PROTEIN SCI, V5, P932
[30]   FIRST OBSERVATION OF AN ALPHA-HELIX IN ALPHA,BETA-DEHYDROOLIGOPEPTIDES - CRYSTAL-STRUCTURE OF BOC-VAL-DELTA-PHE-ALA-LEU-GLY-OME [J].
RAJASHANKAR, KR ;
RAMAKUMAR, S ;
JAIN, RM ;
CHAUHAN, VS .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1995, 117 (40) :10129-10130