Comprehensive analysis of metabolites in Corynebacterium glutamicum by gas chromatography/mass spectrometry

被引:99
作者
Strelkov, S [1 ]
von Elstermann, M [1 ]
Schomburg, D [1 ]
机构
[1] Univ Cologne, Inst Biochem, D-50674 Cologne, Germany
关键词
Corynebacterium glutamicum; gas chromatography; mass spectrometry; metabolic profiling; metabolite; metabolome; metabolomics;
D O I
10.1515/BC.2004.111
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
An analytical method based on gas chromatography/ mass spectrometry was developed for metabolome investigation of Corynebacterium glutamicum. For the first time a fast method for metabolic screening that can be automated is described for this organism. More than 1000 compounds could be detected per experiment, ca. 330 of those showed a peak area significantly above background. Out of these 164 compounds were identified so far, representing derivatives of 121 different metabolites, which were quantified in one sample. In spite of the different chemical nature of metabolites and high matrix content, a measurement reproducibility in the range of 6% error was achieved. The application of this method for the analysis of the adaptation of C. glutamicum to different growth conditions is demonstrated.
引用
收藏
页码:853 / 861
页数:9
相关论文
共 33 条
[1]  
Blau K., 1977, HDB DERIVATIVES CHRO
[2]   Quantification of intracellular metabolites in Escherichia coli K12 using liquid chromatographic-electrospray ionization tandem mass spectrometric techniques [J].
Buchholz, A ;
Takors, R ;
Wandrey, C .
ANALYTICAL BIOCHEMISTRY, 2001, 295 (02) :129-137
[3]   Complete sucrose metabolism requires fructose phosphotransferase activity in Corynebacterium glutamicum to ensure phosphorylation of liberated fructose [J].
Dominguez, H ;
Lindley, ND .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1996, 62 (10) :3878-3880
[4]   Identification of uncommon plant metabolites based on calculation of elemental compositions using gas chromatography and quadrupole mass spectrometry [J].
Fiehn, O ;
Kopka, J ;
Trethewey, RN ;
Willmitzer, L .
ANALYTICAL CHEMISTRY, 2000, 72 (15) :3573-3580
[5]   Metabolite profiling for plant functional genomics [J].
Fiehn, O ;
Kopka, J ;
Dörmann, P ;
Altmann, T ;
Trethewey, RN ;
Willmitzer, L .
NATURE BIOTECHNOLOGY, 2000, 18 (11) :1157-1161
[6]   Metabolomics - the link between genotypes and phenotypes [J].
Fiehn, O .
PLANT MOLECULAR BIOLOGY, 2002, 48 (1-2) :155-171
[7]   Combining genomics, metabolome analysis, and biochemical modelling to understand metabolic networks [J].
Fiehn, O .
COMPARATIVE AND FUNCTIONAL GENOMICS, 2001, 2 (03) :155-168
[8]   Carbohydrate profiling of bacteria by gas chromatography-mass spectrometry and their trace detection in complex matrices by gas chromatography-tandem mass spectrometry [J].
Fox, A .
JOURNAL OF CHROMATOGRAPHY A, 1999, 843 (1-2) :287-300
[9]   ANALYSIS OF MYCOLIC ACIDS FROM A GROUP OF CORYNEBACTERIA BY CAPILLARY GAS-CHROMATOGRAPHY AND MASS-SPECTROMETRY [J].
GAILLY, C ;
SANDRA, P ;
VERZELE, M ;
COCITO, C .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1982, 125 (01) :83-94
[10]  
GEHRKE C W, 1970, Journal of Chromatography, V53, P201, DOI 10.1016/S0021-9673(01)98459-6