Arabidopsis transcription factors:: Genome-wide comparative analysis among eukaryotes

被引：2227

作者：

Riechmann, JL ^{[1
]}

Heard, J ^{[1
]}

Martin, G ^{[1
]}

Reuber, L ^{[1
]}

Jiang, CZ ^{[1
]}

Keddie, J ^{[1
]}

Adam, L ^{[1
]}

Pineda, O ^{[1
]}

Ratcliffe, OJ ^{[1
]}

Samaha, RR ^{[1
]}

Creelman, R ^{[1
]}

Pilgrim, M ^{[1
]}

Broun, P ^{[1
]}

Zhang, JZ ^{[1
]}

Ghandehari, D ^{[1
]}

Sherman, BK ^{[1
]}

Yu, CL ^{[1
]}

机构：

[1] Mendel Biotechnol, Hayward, CA 94545 USA

来源：

SCIENCE | 2000年 / 290卷 / 5499期

关键词：

D O I：

10.1126/science.290.5499.2105

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

The completion of the Arabidopsis thaliana genome sequence allows a comparative analysis of transcriptional regulators across the three eukaryotic kingdoms. Arabidopsis dedicates over 5% of its genome to code for more than 1500 transcription factors, about 45% of which are from families specific to plants. Arabidopsis transcription factors that belong to families common to all eukaryotes do not share significant similarity with those of the other kingdoms beyond the conserved DNA binding domains, many of which have been arranged in combinations specific to each lineage. The genome-wide comparison reveals the evolutionary generation of diversity in the regulation of transcription.

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页码：2105 / 2110

页数：6

相关论文

共 51 条

[1] The genome sequence of Drosophila melanogaster [J].

Adams, MD ;

Celniker, SE ;

Holt, RA ;

Evans, CA ;

Gocayne, JD ;

Amanatides, PG ;

Scherer, SE ;

Li, PW ;

Hoskins, RA ;

Galle, RF ;

George, RA ;

Lewis, SE ;

Richards, S ;

Ashburner, M ;

Henderson, SN ;

Sutton, GG ;

Wortman, JR ;

Yandell, MD ;

Zhang, Q ;

Chen, LX ;

Brandon, RC ;

Rogers, YHC ;

Blazej, RG ;

Champe, M ;

Pfeiffer, BD ;

Wan, KH ;

Doyle, C ;

Baxter, EG ;

Helt, G ;

Nelson, CR ;

Miklos, GLG ;

Abril, JF ;

Agbayani, A ;

An, HJ ;

Andrews-Pfannkoch, C ;

Baldwin, D ;

Ballew, RM ;

Basu, A ;

Baxendale, J ;

Bayraktaroglu, L ;

Beasley, EM ;

Beeson, KY ;

Benos, PV ;

Berman, BP ;

Bhandari, D ;

Bolshakov, S ;

Borkova, D ;

Botchan, MR ;

Bouck, J ;

Brokstein, P .

SCIENCE, 2000, 287 (5461) :2185-2195

[2] Genes involved in organ separation in Arabidopsis: An analysis of the cup-shaped cotyledon mutant [J].

Aida, M ;

Ishida, T ;

Fukaki, H ;

Fujisawa, H ;

Tasaka, M .

PLANT CELL, 1997, 9 (06) :841-857

[3] A novel mode of DNA recognition by a β-sheet revealed by the solution structure of the GCC-box binding domain in complex with DNA [J].

Allen, MD ;

Yamasaki, K ;

Ohme-Takagi, M ;

Tateno, M ;

Suzuki, M .

EMBO JOURNAL, 1998, 17 (18) :5484-5496

[4] An ancestral MADS-box gene duplication occurred before the divergence of plants and animals [J].

Alvarez-Buylla, ER ;

Pelaz, S ;

Liljegren, SJ ;

Gold, SE ;

Burgeff, C ;

Ditta, GS ;

de Pouplana, LR ;

Martinez-Castilla, L ;

Yanofsky, MF .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2000, 97 (10) :5328-5333

[5] Evidence of domain swapping within the jumonji family of transcription factors [J].

Balciunas, D ;

Ronne, H .

TRENDS IN BIOCHEMICAL SCIENCES, 2000, 25 (06) :274-276

[6] ANIMALS AND FUNGI ARE EACH OTHERS CLOSEST RELATIVES - CONGRUENT EVIDENCE FROM MULTIPLE PROTEINS [J].

BALDAUF, SL ;

PALMER, JD .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1993, 90 (24) :11558-11562

[7] The galvanization of biology: A growing appreciation for the roles of zinc [J].

Berg, JM ;

Shi, YG .

SCIENCE, 1996, 271 (5252) :1081-1085

[8] Extensive duplication and reshuffling in the arabidopsis genome [J].

Blanc, G ;

Barakat, A ;

Guyot, R ;

Cooke, R ;

Delseny, I .

PLANT CELL, 2000, 12 (07) :1093-1101

[9] Implication of tubby proteins as transcription factors by structure-based functional analysis [J].

Boggon, TJ ;

Shan, WS ;

Santagata, S ;

Myers, SC ;

Shapiro, L .

SCIENCE, 1999, 286 (5447) :2119-2125

[10] The YABBY gene family and abaxial cell fate [J].

Bowman, JL .

CURRENT OPINION IN PLANT BIOLOGY, 2000, 3 (01) :17-22

← 1 2 3 4 5 6 →