Arabidopsis transcription factors:: Genome-wide comparative analysis among eukaryotes

被引：2227

作者：

Riechmann, JL ^{[1
]}

Heard, J ^{[1
]}

Martin, G ^{[1
]}

Reuber, L ^{[1
]}

Jiang, CZ ^{[1
]}

Keddie, J ^{[1
]}

Adam, L ^{[1
]}

Pineda, O ^{[1
]}

Ratcliffe, OJ ^{[1
]}

Samaha, RR ^{[1
]}

Creelman, R ^{[1
]}

Pilgrim, M ^{[1
]}

Broun, P ^{[1
]}

Zhang, JZ ^{[1
]}

Ghandehari, D ^{[1
]}

Sherman, BK ^{[1
]}

Yu, CL ^{[1
]}

机构：

[1] Mendel Biotechnol, Hayward, CA 94545 USA

来源：

SCIENCE | 2000年 / 290卷 / 5499期

关键词：

D O I：

10.1126/science.290.5499.2105

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

The completion of the Arabidopsis thaliana genome sequence allows a comparative analysis of transcriptional regulators across the three eukaryotic kingdoms. Arabidopsis dedicates over 5% of its genome to code for more than 1500 transcription factors, about 45% of which are from families specific to plants. Arabidopsis transcription factors that belong to families common to all eukaryotes do not share significant similarity with those of the other kingdoms beyond the conserved DNA binding domains, many of which have been arranged in combinations specific to each lineage. The genome-wide comparison reveals the evolutionary generation of diversity in the regulation of transcription.

引用

页码：2105 / 2110

页数：6

共 51 条

[41]

Riechmann JL, 1998, BIOL CHEM, V379, P633

[42] Comparative genomics of the eukaryotes [J].

Rubin, GM ;

Yandell, MD ;

Wortman, JR ;

Miklos, GLG ;

Nelson, CR ;

Hariharan, IK ;

Fortini, ME ;

Li, PW ;

Apweiler, R ;

Fleischmann, W ;

Cherry, JM ;

Henikoff, S ;

Skupski, MP ;

Misra, S ;

Ashburner, M ;

Birney, E ;

Boguski, MS ;

Brody, T ;

Brokstein, P ;

Celniker, SE ;

Chervitz, SA ;

Coates, D ;

Cravchik, A ;

Gabrielian, A ;

Galle, RF ;

Gelbart, WM ;

George, RA ;

Goldstein, LSB ;

Gong, FC ;

Guan, P ;

Harris, NL ;

Hay, BA ;

Hoskins, RA ;

Li, JY ;

Li, ZY ;

Hynes, RO ;

Jones, SJM ;

Kuehl, PM ;

Lemaitre, B ;

Littleton, JT ;

Morrison, DK ;

Mungall, C ;

O'Farrell, PH ;

Pickeral, OK ;

Shue, C ;

Vosshall, LB ;

Zhang, J ;

Zhao, Q ;

Zheng, XQH ;

Zhong, F .

SCIENCE, 2000, 287 (5461) :2204-2215

[43] The taxonomy of developmental control in Caenorhabditis elegans [J].

Ruvkun, G ;

Hobert, O .

SCIENCE, 1998, 282 (5396) :2033-2041

[44] A plant regulator controlling development of symbiotic root nodules [J].

Schauser, L ;

Roussis, A ;

Stiller, J ;

Stougaard, J .

NATURE, 1999, 402 (6758) :191-195

[45] Regulation of the heat-shock response [J].

Schöffl, F ;

Prändl, R ;

Reindl, A .

PLANT PHYSIOLOGY, 1998, 117 (04) :1135-1141

[46] Development: The natural history of genes [J].

Scott, MP .

CELL, 2000, 100 (01) :27-40

[47] Crystal structure of a Smad MH1 domain bound to DNA:: Insights on DNA binding in TGF-β signaling [J].

Shi, YG ;

Wang, YF ;

Jayaraman, L ;

Yang, HJ ;

Massagué, J ;

Pavletich, NP .

CELL, 1998, 94 (05) :585-594

[48] Diversification pattern of the HMG and SOX family members during evolution [J].

Soullier, S ;

Jay, P ;

Poulat, F ;

Vanacker, JM ;

Berta, P ;

Laudet, V .

JOURNAL OF MOLECULAR EVOLUTION, 1999, 48 (05) :517-527

[49] A short history of MADS-box genes in plants [J].

Theissen, G ;

Becker, A ;

Di Rosa, A ;

Kanno, A ;

Kim, JT ;

Münster, T ;

Winter, KU ;

Saedler, H .

PLANT MOLECULAR BIOLOGY, 2000, 42 (01) :115-149

[50] Molecular evidence for an ancient duplication of the entire yeast genome [J].

Wolfe, KH ;

Shields, DC .

NATURE, 1997, 387 (6634) :708-713

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