A microarray analysis of early activated pathways in concanavalin A-induced hepatitis

被引:13
作者
Cao, Qing-yi [1 ]
Chen, Feng [1 ]
Li, Jie [1 ]
Wu, Shan-shan [1 ]
Wang, Jing [1 ]
Chen, Zhi [1 ]
机构
[1] Zhejiang Univ, State Key Lab Diag & Treatment Infect Dis, Affiliated Hosp 1, Sch Med, Hangzhou 310003, Zhejiang, Peoples R China
基金
中国国家自然科学基金;
关键词
Concanavalin A; Fulminant hepatitis; Microarray; Expression profile; Pathway analysis; TOLL-LIKE RECEPTORS; FULMINANT-HEPATITIS; LIVER-INJURY; MICE; EXPRESSION; DISEASE; CYTOTOXICITY; APOPTOSIS; FAILURE; VIRUS;
D O I
10.1631/jzus.B1000020
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
070307 [化学生物学]; 071010 [生物化学与分子生物学];
摘要
To explore the mechanisms of fulminant hepatitis (FH) in the early stages, and to determine the critical pathways in its initiation and progression. Twelve BALB/c mice were divided into four groups: one group left as negative control and sacrificed immediately after injection of phosphate-buffered saline (PBS), and another three groups with concanavalin A (Con A) administration sacrificed at 1, 3, and 6 h after injection. Affymetrix GeneChipA (R) Mouse 430 2.0 Array was employed to evaluate the expression profile of each of the 12 samples. Further analysis was done on the microarray data to extract the genes that were differentially expressed. Enrichment analysis was carried out to determine relevant pathways within which regulated genes were significantly enriched. A total of 393, 8354 and 11344 differentially expressed genes were found, respectively, at three time points. During 0-1 h and 1-3 h, most of the pathways enriched with regulated genes were related to immune response and inflammation, among which Toll-like receptor (TLR) signaling and mitogen-activated protein kinase (MAPK) signaling appeared during both phases, while cytokine-cytokine receptor interaction, apoptosis, T cell receptor signaling, and natural killer (NK) cell-mediated cytotoxicity pathways emerged during the second phase. Pathways found to be significant during 3-6 h were mostly related to metabolic processes. The TLR signaling pathway dominates the early responses of Con A-induced FH in mice. It stimulates the production of type I cytokines, therefore recruiting and activating T/NK cells. Activated T/NK cells exert their cytotoxicity on hepatocytes through inducing death receptor-intermediated apoptosis, resulting in liver injury.
引用
收藏
页码:366 / 377
页数:12
相关论文
共 27 条
[1]
Gene Ontology: tool for the unification of biology [J].
Ashburner, M ;
Ball, CA ;
Blake, JA ;
Botstein, D ;
Butler, H ;
Cherry, JM ;
Davis, AP ;
Dolinski, K ;
Dwight, SS ;
Eppig, JT ;
Harris, MA ;
Hill, DP ;
Issel-Tarver, L ;
Kasarskis, A ;
Lewis, S ;
Matese, JC ;
Richardson, JE ;
Ringwald, M ;
Rubin, GM ;
Sherlock, G .
NATURE GENETICS, 2000, 25 (01) :25-29
[2]
The Liver as a Lymphoid Organ [J].
Crispe, Ian Nicholas .
ANNUAL REVIEW OF IMMUNOLOGY, 2009, 27 :147-163
[3]
Deyholos MK, 2001, CYTOMETRY, V43, P229, DOI 10.1002/1097-0320(20010401)43:4<229::AID-CYTO1055>3.3.CO
[4]
2-U
[5]
Dissection of the multiple mechanisms of TNF-α-induced apoptosis in liver injury [J].
Ding, WX ;
Yin, XM .
JOURNAL OF CELLULAR AND MOLECULAR MEDICINE, 2004, 8 (04) :445-454
[6]
Cluster analysis and display of genome-wide expression patterns [J].
Eisen, MB ;
Spellman, PT ;
Brown, PO ;
Botstein, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1998, 95 (25) :14863-14868
[7]
GAO LF, 2002, CHIN J CELL MOL IMMU, V18, P104
[9]
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources [J].
Huang, Da Wei ;
Sherman, Brad T. ;
Lempicki, Richard A. .
NATURE PROTOCOLS, 2009, 4 (01) :44-57
[10]
Etiology and prognosis of fulminant hepatitis in adults [J].
Ichai, Philippe ;
Samuel, Didier .
LIVER TRANSPLANTATION, 2008, 14 (10) :S67-S79