Human immunodeficiency virus-specific responses in adult Ugandans: Patterns of cross-clade recognition

被引:20
作者
Barugahare, B
Baker, C
K'Aluoch, O
Donovan, R
Elrefaei, M
Eggena, M
Jones, N
Mutalya, S
Kityo, C
Mugyenyi, P
Cao, HY
机构
[1] Calif Dept Hlth Serv, Richmond, CA 94804 USA
[2] Joint Clin Res Ctr, Kampala, Uganda
[3] Univ Calif San Francisco, San Francisco, CA 94143 USA
关键词
D O I
10.1128/JVI.79.7.4132-4139.2005
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Human immunodeficiency virus (HIV) or AIDS is currently the leading cause of death in Uganda, with at least three HIV clades (subtypes) accounting for most new infections. Whether an effective vaccine formulated on viruses from a single clade will be able to protect against infection from other local clades remains unresolved. We examined the T-cell immune responses from a cohort of HIV-seropositive individuals in Uganda with predominantly clade A and D infections. Surprisingly, we observed similar frequencies of cross-clade T-cell responses to the gag, env, and nef regions. Our data suggest that the level of viral sequence variability between distinct HIV strains does not predict the degree of cross-clade responses. High sequence homologies were also observed between consensus peptides and sequences from viral isolates, supporting the use of consensus amino acid sequences to identify immunogenic regions in studies of large populations.
引用
收藏
页码:4132 / 4139
页数:8
相关论文
共 47 条
[11]   Analysis of the frequencies of HLA-A, B, and C alleles and haplotypes in the five major ethnic groups of the United States reveals high levels of diversity in these loci and contrasting distribution patterns in these populations [J].
Cao, K ;
Hollenbach, J ;
Shi, XJ ;
Shi, WX ;
Chopek, M ;
Fernández-Viña, MA .
HUMAN IMMUNOLOGY, 2001, 62 (09) :1009-1030
[12]   Skewed maturation of memory HIV-specific CD8 T lymphocytes [J].
Champagne, P ;
Ogg, GS ;
King, AS ;
Knabenhans, C ;
Ellefsen, K ;
Nobile, M ;
Appay, V ;
Rizzardi, GP ;
Fleury, S ;
Lipp, M ;
Förster, R ;
Rowland-Jones, S ;
Sékaly, RP ;
McMichael, AJ ;
Pantaleo, G .
NATURE, 2001, 410 (6824) :106-111
[13]   Human immunodeficiency virus type 1 (HIV-1) quasispecies at the sites of Mycobacterium tuberculosis infection contribute to systemic HIV-1 heterogeneity [J].
Collins, KR ;
Quiñones-Mateu, ME ;
Wu, M ;
Luzze, H ;
Johnson, JL ;
Hirsch, C ;
Toossi, Z ;
Arts, EJ .
JOURNAL OF VIROLOGY, 2002, 76 (04) :1697-1706
[14]   Human immunodeficiency virus type 1 subtypes defined by env show high frequency of recombinant gag genes [J].
Cornelissen, M ;
Kampinga, G ;
Zorgdrager, F ;
Goudsmit, J .
JOURNAL OF VIROLOGY, 1996, 70 (11) :8209-8212
[15]   Cross-reactions between the cytotoxic T-lymphocyte responses of human immunodeficiency virus-infected African and European patients [J].
Durali, D ;
Morvan, J ;
Letourneur, F ;
Schmitt, D ;
Guegan, N ;
Dalod, M ;
Saragosti, S ;
Sicard, D ;
Levy, JP ;
Gomard, E .
JOURNAL OF VIROLOGY, 1998, 72 (05) :3547-3553
[16]   Generation of a consensus sequence from prevalent and incident HIV-1 infections in West Africa to guide AIDS vaccine development [J].
Ellenberger, DL ;
Li, B ;
Lupo, LD ;
Owen, SM ;
Nkengasong, J ;
Kadio-Morokro, MS ;
Smith, J ;
Robinson, H ;
Ackers, M ;
Greenberg, A ;
Folks, T ;
Butera, S .
VIROLOGY, 2002, 302 (01) :155-163
[17]   HLA-A and -B allele expression and ability to develop anti-Gag cross-clade responses in subtype CHIV-1-infected Ethiopians [J].
Ferrari, G ;
Currier, JR ;
Harris, ME ;
Finkelstein, S ;
de Oliveira, A ;
Barkhan, D ;
Cox, JH ;
Zeira, M ;
Weinhold, KJ ;
Reinsmoen, N ;
McCutchan, F ;
Birx, DL ;
Osmanov, S ;
Maayan, S .
HUMAN IMMUNOLOGY, 2004, 65 (06) :648-659
[18]   Clade B-based HIV-1 vaccines elicit cross-clade cytotoxic T lymphocyte reactivities in uninfected volunteers [J].
Ferrari, G ;
Humphrey, W ;
McElrath, MJ ;
Excler, JL ;
Duliege, AM ;
Clements, ML ;
Corey, LC ;
Bolognesi, DP ;
Weinhold, KJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1997, 94 (04) :1396-1401
[19]   Consistent cytotoxic-T-lymphocyte targeting of immunodominant regions in human immunodeficiency virus across multiple ethnicities [J].
Frahm, N ;
Korber, BT ;
Adams, CM ;
Szinger, JJ ;
Draenert, R ;
Addo, MM ;
Feeney, ME ;
Yusim, K ;
Sango, K ;
Brown, NV ;
SenGupta, D ;
Piechocka-Trocha, A ;
Simonis, T ;
Marincola, FM ;
Wurcel, AG ;
Stone, DR ;
Russell, CJ ;
Adolf, P ;
Cohen, D ;
Roach, T ;
StJohn, A ;
Khatri, A ;
Davis, K ;
Mullins, J ;
Goulder, PJR ;
Walker, BD ;
Brander, C .
JOURNAL OF VIROLOGY, 2004, 78 (05) :2187-2200
[20]   GENETIC DIVERSITY OF HUMAN-IMMUNODEFICIENCY-VIRUS TYPE-2 - EVIDENCE FOR DISTINCT SEQUENCE SUBTYPES WITH DIFFERENCES IN VIRUS BIOLOGY [J].
GAO, F ;
YUE, L ;
ROBERTSON, DL ;
HILL, SC ;
HUI, HX ;
BIGGAR, RJ ;
NEEQUAYE, AE ;
WHELAN, TM ;
HO, DD ;
SHAW, GM ;
SHARP, PM ;
HAHN, BH .
JOURNAL OF VIROLOGY, 1994, 68 (11) :7433-7447