β-globin active chromatin hub formation in differentiating erythroid cells and in p45 NF-E2 knock-out mice

被引:58
作者
Kooren, Jurgen
Palstra, Robert-Jan
Klous, Petra
Splinter, Erik
von Lindern, Marieke
Grosveld, Frank
de Laat, Wouter
机构
[1] Erasmus MC, Dept Cell Biol & Genet, NL-3000 CA Rotterdam, Netherlands
[2] Erasmus MC, Dept Hematol, NL-3000 CA Rotterdam, Netherlands
关键词
D O I
10.1074/jbc.M701159200
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Expression of the beta-globin genes proceeds from basal to exceptionally high levels during erythroid differentiation in vivo. High expression is dependent on the locus control region (LCR) and coincides with more frequent LCR-gene contacts. These contacts are established in the context of an active chromatin hub (ACH), a spatial chromatin configuration in which the LCR, together with other regulatory sequences, loops toward the active beta-globin-like genes. Here, we used recently established I/11 cells as a model system that faithfully recapitulates the in vivo erythroid differentiation program to study the molecular events that accompany and underlie ACH formation. Upon I/11 cell induction, histone modifications changed, the ACH was formed, and the beta-globin-like genes were transcribed at rates similar to those observed in vivo. The establishment of frequent LCR-gene contacts coincided with a more efficient loading of polymerase onto the beta-globin promoter. Binding of the transcription factors GATA-1 and EKLF to the locus, although previously shown to be required, was not sufficient for ACH formation. Moreover, we used knock-out mice to show that the erythroid transcription factor p45 NF-E2, which has been implicated in beta-globin gene regulation, is dispensable for beta-globin ACH formation.
引用
收藏
页码:16544 / 16552
页数:9
相关论文
共 46 条
[1]   ERYTHROID TRANSCRIPTION FACTOR NF-E2 IS A HEMATOPOIETIC-SPECIFIC BASIC LEUCINE ZIPPER PROTEIN [J].
ANDREWS, NC ;
ERDJUMENTBROMAGE, H ;
DAVIDSON, MB ;
TEMPST, P ;
ORKIN, SH .
NATURE, 1993, 362 (6422) :722-728
[2]   Flanking HS-62.5 and 3′ HS1, and regions upstream of the LCR, are not required for β-globin transcription [J].
Bender, M. A. ;
Byron, Rachel ;
Ragoczy, Tobias ;
Telling, Agnes ;
Bulger, Michael ;
Groudine, Mark .
BLOOD, 2006, 108 (04) :1395-1401
[3]   β-globin gene switching and DNase I sensitivity of the endogenous β-globin locus in mice do not require the locus control region [J].
Bender, MA ;
Bulger, M ;
Close, J ;
Groudine, M .
MOLECULAR CELL, 2000, 5 (02) :387-393
[4]   Lineage-specific activators affect β-globin locus chromatin in multipotent hematopoietic progenitors [J].
Bottardi, Stefania ;
Ross, Julie ;
Pierre-Charles, Natacha ;
Blank, Volker ;
Milot, Eric .
EMBO JOURNAL, 2006, 25 (15) :3586-3595
[5]   Dynamic changes in transcription factor complexes during erythroid differentiation revealed by quantitative proteomics [J].
Brand, M ;
Ranish, JA ;
Kummer, NT ;
Hamilton, J ;
Igarashi, K ;
Francastel, C ;
Chi, TH ;
Crabtree, GR ;
Aebersold, R ;
Groudine, M .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2004, 11 (01) :73-80
[6]   Targeted disruption of the ubiquitous CNC-bZIP transcription factor, Nrf-1, results in anemia and embryonic lethality in mice [J].
Chan, JY ;
Kwong, M ;
Lu, RH ;
Chang, J ;
Wang, B ;
Yen, TSB ;
Kan, YW .
EMBO JOURNAL, 1998, 17 (06) :1779-1787
[7]   Spatial organization of gene expression: the active chromatin hub [J].
de Laat, W ;
Grosveld, F .
CHROMOSOME RESEARCH, 2003, 11 (05) :447-459
[8]   Capturing chromosome conformation [J].
Dekker, J ;
Rippe, K ;
Dekker, M ;
Kleckner, N .
SCIENCE, 2002, 295 (5558) :1306-1311
[9]   Complexity of CNC transcription factors as revealed by gene targeting of the Nrf3 locus [J].
Derjuga, A ;
Gourley, TS ;
Holm, TM ;
Heng, HHQ ;
Shivdasani, RA ;
Ahmed, R ;
Andrews, NC ;
Blank, V .
MOLECULAR AND CELLULAR BIOLOGY, 2004, 24 (08) :3286-3294
[10]  
Dolznig H, 2004, METH MOLEC MED, V105, P323