A network of rice genes associated with stress response and seed development

被引:198
作者
Cooper, B [1 ]
Clarke, JD [1 ]
Budworth, P [1 ]
Kreps, J [1 ]
Hutchison, D [1 ]
Park, S [1 ]
Guimil, S [1 ]
Dunn, M [1 ]
Luginbühl, P [1 ]
Ellero, C [1 ]
Goff, SA [1 ]
Glazebrook, J [1 ]
机构
[1] Torrey Mesa Res Inst, San Diego, CA 92121 USA
关键词
D O I
10.1073/pnas.0737574100
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
We used a systematic approach to build a network of genes associated with developmental and stress responses in rice by identifying interaction domains for 200 proteins from stressed and developing tissues, by measuring the associated gene expression changes in different tissues exposed to a variety of environmental, biological, and chemical stress treatments, and by localizing the cognate genes to regions of stress-tolerance trait genetic loci. The integrated data set suggests that similar genes respond to environmental cues and stresses, and some may also regulate development. We demonstrate that the data can be used to correctly predict gene function in monocots and dicots. As a result, we have identified five genes that contribute to disease resistance in Arabidopsis.
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收藏
页码:4945 / 4950
页数:6
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