Positive-feed back loops as a flexible biological module

被引:85
作者
Ingolia, Nicholas T. [1 ]
Murray, Andrew W. [1 ]
机构
[1] Harvard Univ, Dept Mol & Cellular Biol, Cambridge, MA 02138 USA
关键词
D O I
10.1016/j.cub.2007.03.016
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background: Bistability in genetic networks allows cells to remember past events and to make discrete decisions in response to graded signals. Bistable behavior can result from positive feedback, but feedback loops can have other roles in signal transduction as well. Results: We introduced positive feedback into the budding-yeast pheromone response to convert it into a bistable system. In the presence of feedback, transient induction with high pheromone levels caused persistent pathway activation, whereas at lower levels a fraction of cells became persistently active but the rest inactivated completely. We also generated mutations that quantitatively tuned the basal and induced expression levels of the feedback promoter and showed that they qualitatively changed the behavior of the system. Finally, we developed a simple stochastic model of our positive-feed back system and showed the agreement between our simulations and experimental results. Conclusions: The positive-feed back loop can display several different behaviors, including bistability, and can switch between them as a result of simple mutations.
引用
收藏
页码:668 / 677
页数:10
相关论文
共 43 条
  • [1] Enhancement of cellular memory by reducing stochastic transitions
    Acar, M
    Becskei, A
    van Oudenaarden, A
    [J]. NATURE, 2005, 435 (7039) : 228 - 232
  • [2] The topology of the regulatory interactions predicts the expression pattern of the segment polarity genes in Drosophila melanogaster
    Albert, R
    Othmer, HG
    [J]. JOURNAL OF THEORETICAL BIOLOGY, 2003, 223 (01) : 1 - 18
  • [3] Tuning genetic control through promoter engineering
    Alper, H
    Fischer, C
    Nevoigt, E
    Stephanopoulos, G
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (36) : 12678 - 12683
  • [4] [Anonymous], 2019, Nonlinear Dynamics and Chaos: With Applications to Physics, Biology, Chemistry, and Engineering
  • [5] The interpretation of morphogen gradients
    Ashe, HL
    Briscoe, J
    [J]. DEVELOPMENT, 2006, 133 (03): : 385 - 394
  • [6] Development of genetic circuitry exhibiting toggle switch or oscillatory behavior in Escherichia coli
    Atkinson, MR
    Savageau, MA
    Myers, JT
    Ninfa, AJ
    [J]. CELL, 2003, 113 (05) : 597 - 607
  • [7] Bacterial persistence as a phenotypic switch
    Balaban, NQ
    Merrin, J
    Chait, R
    Kowalik, L
    Leibler, S
    [J]. SCIENCE, 2004, 305 (5690) : 1622 - 1625
  • [8] A walk-through of the yeast mating pheromone response pathway
    Bardwell, L
    [J]. PEPTIDES, 2004, 25 (09) : 1465 - 1476
  • [9] Positive feedback in eukaryotic gene networks:: cell differentiation by graded to binary response conversion
    Becskei, A
    Séraphin, B
    Serrano, L
    [J]. EMBO JOURNAL, 2001, 20 (10) : 2528 - 2535
  • [10] MAP kinase phosphatase as a locus of flexibility in a mitogen-activated protein kinase signaling network
    Bhalla, US
    Ram, PT
    Iyengar, R
    [J]. SCIENCE, 2002, 297 (5583) : 1018 - 1023