Phylogeographic investigations: The role of trees in forensic genetics

被引：80

作者：

Salas, A. ^{[1
]}

Bandelt, H.-J.

Macaulay, V.

Richards, M. B.

机构：

[1] Univ Santiago de Compostela, Fac Med, Inst Med Legal, Unidad Genet, Galicia 15782, Spain

[2] Hosp Clin Univ, Ctr Nacl Genotipado, Galicia 15706, Spain

[3] Univ Hamburg, Dept Math, Hamburg, Germany

[4] Univ Glasgow, Dept Stat, Glasgow, Lanark, Scotland

[5] Univ Leeds, Fac Biol Sci, Inst Integrat & Comparat Biol, Leeds, W Yorkshire, England

来源：

FORENSIC SCIENCE INTERNATIONAL | 2007年 / 168卷 / 01期

关键词：

human mtDNA; HVS-1; HVS-II; control region; coding regions SNPs; error detection; networks; phylogenetic analysis; SWGDAM; forensic genetics; MITOCHONDRIAL GENOME VARIATION; CONTROL-REGION SEQUENCES; MTDNA HAPLOGROUP-H; COLLABORATIVE EXERCISE; DNA RECOMBINATION; HUMAN-POPULATIONS; CODING REGION; EDNAP GROUP; GEP-ISFG; HETEROPLASMY;

D O I：

10.1016/j.forsciint.2006.05.037

中图分类号：

DF [法律]; D9 [法律]; R [医药、卫生];

学科分类号：

0301 ; 10 ;

摘要：

The human mitochondrial DNA (mtDNA) genome is commonly analyzed in various disciplines, such as population, medical, and forensic genetics, but conceptual and scientific exchange between them is still limited. Here we review several aspects of the mtDNA phylogeny that are particularly - but not exclusively - of interest to the forensic community. Among the issues that arise, we emphasize the importance of integrating evolutionary concepts into the forensic routine. We also discuss topics such as mtDNA mutation-rate heterogeneity and the weight of evidence, ethnic affiliations of mtDNA profiles, and the abuse of reference databases. Finally, we show the usefulness of coding-region variation in a forensic context. (C) 2006 Elsevier Ireland Ltd. All rights reserved.

引用

页码：1 / 13

页数：13

共 113 条

[1] The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool [J].

Achilli, A ;

Rengo, C ;

Magri, C ;

Battaglia, V ;

Olivieri, A ;

Scozzari, R ;

Cruciani, F ;

Zeviani, M ;

Briem, E ;

Carelli, V ;

Moral, P ;

Dugoujon, JM ;

Roostalu, U ;

Loogväli, EL ;

Kivisild, T ;

Bandelt, HJ ;

Richards, M ;

Villems, R ;

Santachiara-Benerecetti, AS ;

Semino, O ;

Torroni, A .

AMERICAN JOURNAL OF HUMAN GENETICS, 2004, 75 (05) :910-918

[2] Saami and Berbers - An unexpected mitochondrial DNA link [J].

Achilli, A ;

Rengo, C ;

Battaglia, V ;

Pala, M ;

Olivieri, A ;

Fornarino, S ;

Magri, C ;

Scozzari, R ;

Babudri, N ;

Santachiara-Benerecetti, AS ;

Bandelt, HJ ;

Semino, O ;

Torroni, A .

AMERICAN JOURNAL OF HUMAN GENETICS, 2005, 76 (05) :883-886

[3]

Allard Marc W, 2004, Leg Med (Tokyo), V6, P11, DOI 10.1016/j.legalmed.2003.08.004

[4] Characterization of human control region sequences of the African American SWGDAM forensic mtDNA data set [J].

Allard, MW ;

Polanskey, D ;

Miller, K ;

Wilson, MR ;

Monson, KL ;

Budowle, B .

FORENSIC SCIENCE INTERNATIONAL, 2005, 148 (2-3) :169-179

[5]

Allard MW, 2002, J FORENSIC SCI, V47, P1215

[6] Results of the 1999-2000 collaborative exercise and proficiency testing program on mitochondrial DNA of the GEP-ISFG:: an inter-laboratory study of the observed variability in the heteroplasmy level of hair from the same donor [J].

Alonso, A ;

Salas, A ;

Albarrán, C ;

Arroyo, E ;

Castro, A ;

Crespillo, M ;

di Lonardo, AM ;

Lareu, MV ;

Cubría, CL ;

Soto, ML ;

Lorente, JA ;

Semper, MM ;

Palacio, A ;

Paredes, M ;

Pereira, L ;

Lezaun, AP ;

Brito, JP ;

Sala, A ;

Vide, MC ;

Whittle, M ;

Yunis, JJ ;

Gómez, J .

FORENSIC SCIENCE INTERNATIONAL, 2002, 125 (01) :1-7

[7] The ancestry of Brazilian mtDNA lineages [J].

Alves-Silva, J ;

Santos, MD ;

Guimaraes, PEM ;

Ferreira, ACS ;

Bandelt, HJ ;

Pena, SDJ ;

Prado, VF .

AMERICAN JOURNAL OF HUMAN GENETICS, 2000, 67 (02) :444-461

[8] SEQUENCE AND ORGANIZATION OF THE HUMAN MITOCHONDRIAL GENOME [J].

ANDERSON, S ;

BANKIER, AT ;

BARRELL, BG ;

DEBRUIJN, MHL ;

COULSON, AR ;

DROUIN, J ;

EPERON, IC ;

NIERLICH, DP ;

ROE, BA ;

SANGER, F ;

SCHREIER, PH ;

SMITH, AJH ;

STADEN, R ;

YOUNG, IG .

NATURE, 1981, 290 (5806) :457-465

[9]

AVISE JC, 1987, ANNU REV ECOL SYST, V18, P489, DOI 10.1146/annurev.es.18.110187.002421

[10] DNA PROFILE MATCH PROBABILITY CALCULATION - HOW TO ALLOW FOR POPULATION STRATIFICATION, RELATEDNESS, DATABASE SELECTION AND SINGLE BANDS [J].

BALDING, DJ ;

NICHOLS, RA .

FORENSIC SCIENCE INTERNATIONAL, 1994, 64 (2-3) :125-140

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