GOBASE - a database of mitochondrial and chloroplast information

被引:25
作者
O'Brien, EA [1 ]
Badidi, E [1 ]
Barbasiewicz, A [1 ]
deSousa, C [1 ]
Lang, BF [1 ]
Burger, G [1 ]
机构
[1] Univ Montreal, Dept Biochim, Canadian Inst Adv Res, Program Evolutionary Biol, Montreal, PQ H3T 1J4, Canada
基金
加拿大健康研究院;
关键词
D O I
10.1093/nar/gkg090
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
GOBASE is a relational database containing integrated sequence, RNA secondary structure and biochemical and taxonomic information about organelles. GOBASE release 6 (summer 2002) contains over 130 000 mitochondrial sequences, an increase of 37% over the previous release, and more than 30 000 chloroplast sequences in a new auxiliary database. To handle this flood of new data, we have designed and implemented GOpop, a Java system for population and veri cation of the database. We have also implemented a more powerful and flexible user interface using the PHP programming language. http://megasun.bch.umontreal.ca/gobase/gobase.html.
引用
收藏
页码:176 / 178
页数:3
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