Unique physiological and pathogenic features of Leptospira interrogans revealed by whole-genome sequencing

被引:454
作者
Ren, SX
Gang, F
Jiang, XG
Zeng, R
Miao, YG
Xu, H
Zhang, YX
Xiong, H
Lu, G
Lu, LF
Jiang, HQ
Jia, J
Tu, YF
Jiang, JX
Gu, WY
Zhang, YQ
Cai, Z
Sheng, HH
Yin, HF
Zhang, Y
Zhu, GF
Wan, M
Huang, HL
Qian, Z
Wang, SY
Ma, W
Yao, ZJ
Shen, Y
Qiang, BQ
Xia, QC
Guo, XK
Danchin, A
Saint Girons, I
Somerville, RL
Wen, YM
Shi, MH
Chen, Z
Xu, JG
Zhao, GP
机构
[1] Chinese Natl Human Genome Ctr Shanghai, Shanghai 201203, Peoples R China
[2] Chinese Acad Sci, Bioinformat Ctr, Inst Biochem & Cell Biol, Shanghai 200031, Peoples R China
[3] Chinese Acad Sci, Inst Plant Physiol & Ecol, Biotechnol Res Ctr, Shanghai 200031, Peoples R China
[4] Chinese Acad Sci, Shanghai Inst Biol Sci, Shanghai 200031, Peoples R China
[5] Shanghai Med Univ 2, Rui Jin Hosp, Dept Microbiol & Parasitol, Shanghai 200025, Peoples R China
[6] Chinese Ctr Dis Control & Prevent, Natl Inst Communicable Dis Control & Prevent, ICDC, China CDC, Beijing 102206, Peoples R China
[7] Chinese Natl Human Genome Ctr, Beijing 100170, Peoples R China
[8] Fudan Univ, Dept Mol Virol, Med Ctr, Shanghai 200032, Peoples R China
[9] HKU, Pasteur Res Ctr, Hong Kong, Hong Kong, Peoples R China
[10] Inst Pasteur, Unite Bacteriol Mol & Med, F-75724 Paris 15, France
[11] Purdue Univ, Dept Biochem, W Lafayette, IN 47907 USA
基金
中国国家自然科学基金;
关键词
D O I
10.1038/nature01597
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Leptospirosis is a widely spread disease of global concern. Infection causes flu-like episodes with frequent severe renal and hepatic damage, such as haemorrhage and jaundice. In more severe cases, massive pulmonary haemorrhages, including fatal sudden haemoptysis, can occur(1). Here we report the complete genomic sequence of a representative virulent serovar type strain (Lai)(2) of Leptospira interrogans serogroup Icterohaemorrhagiae consisting of a 4.33-megabase large chromosome and a 359-kilobase small chromosome, with a total of 4,768 predicted genes. In terms of the genetic determinants of physiological characteristics, the facultatively parasitic L. interrogans differs extensively from two other strictly parasitic pathogenic spirochaetes, Treponema pallidum(3) and Borrelia burgdorferi(4), although similarities exist in the genes that govern their unique morphological features. A comprehensive analysis of the L. interrogans genes for chemotaxis/motility and lipopolysaccharide synthesis provides a basis for in-depth studies of virulence and pathogenesis. The discovery of a series of genes possibly related to adhesion, invasion and the haematological changes that characterize leptospirosis has provided clues about how an environmental organism might evolve into an important human pathogen.
引用
收藏
页码:888 / 893
页数:7
相关论文
共 29 条
[1]   Platelet-activating factor acetylhydrolase (PAF-AH) [J].
Arai, H ;
Koizumi, H ;
Aoki, J ;
Inoue, K .
JOURNAL OF BIOCHEMISTRY, 2002, 131 (05) :635-640
[2]   Localization of the Leptospira interrogans metF gene on the CII secondary chromosome [J].
Bourhy, P ;
Saint Girons, I .
FEMS MICROBIOLOGY LETTERS, 2000, 191 (02) :259-263
[3]   Genetics of motility and chemotaxis of a fascinating group of bacteria: The spirochetes [J].
Charon, NW ;
Goldstein, SF .
ANNUAL REVIEW OF GENETICS, 2002, 36 :47-73
[4]  
CLAROS MG, 1994, COMPUT APPL BIOSCI, V10, P685
[5]   Improved microbial gene identification with GLIMMER [J].
Delcher, AL ;
Harmon, D ;
Kasif, S ;
White, O ;
Salzberg, SL .
NUCLEIC ACIDS RESEARCH, 1999, 27 (23) :4636-4641
[6]   Base-calling of automated sequencer traces using phred.: II.: Error probabilities [J].
Ewing, B ;
Green, P .
GENOME RESEARCH, 1998, 8 (03) :186-194
[7]   Base-calling of automated sequencer traces using phred.: I.: Accuracy assessment [J].
Ewing, B ;
Hillier, L ;
Wendl, MC ;
Green, P .
GENOME RESEARCH, 1998, 8 (03) :175-185
[8]  
Faine S., 1999, LEPTOSPIRA LEPTOSPIR
[9]   Genomic sequence of a Lyme disease spirochaete, Borrelia burgdorferi [J].
Fraser, CM ;
Casjens, S ;
Huang, WM ;
Sutton, GG ;
Clayton, R ;
Lathigra, R ;
White, O ;
Ketchum, KA ;
Dodson, R ;
Hickey, EK ;
Gwinn, M ;
Dougherty, B ;
Tomb, JF ;
Fleischmann, RD ;
Richardson, D ;
Peterson, J ;
Kerlavage, AR ;
Quackenbush, J ;
Salzberg, S ;
Hanson, M ;
vanVugt, R ;
Palmer, N ;
Adams, MD ;
Gocayne, J ;
Weidman, J ;
Utterback, T ;
Watthey, L ;
McDonald, L ;
Artiach, P ;
Bowman, C ;
Garland, S ;
Fujii, C ;
Cotton, MD ;
Horst, K ;
Roberts, K ;
Hatch, B ;
Smith, HO ;
Venter, JC .
NATURE, 1997, 390 (6660) :580-586
[10]   Complete genome sequence of Treponema pallidum, the syphilis spirochete [J].
Fraser, CM ;
Norris, SJ ;
Weinstock, CM ;
White, O ;
Sutton, GG ;
Dodson, R ;
Gwinn, M ;
Hickey, EK ;
Clayton, R ;
Ketchum, KA ;
Sodergren, E ;
Hardham, JM ;
McLeod, MP ;
Salzberg, S ;
Peterson, J ;
Khalak, H ;
Richardson, D ;
Howell, JK ;
Chidambaram, M ;
Utterback, T ;
McDonald, L ;
Artiach, P ;
Bowman, C ;
Cotton, MD ;
Fujii, C ;
Garland, S ;
Hatch, B ;
Horst, K ;
Roberts, K ;
Sandusky, M ;
Weidman, J ;
Smith, HO ;
Venter, JC .
SCIENCE, 1998, 281 (5375) :375-388