Evolutionarily conserved multisubunit RBL2/p130 and E2F4 protein complex represses human cell cycle-dependent genes in quiescence

被引:323
作者
Litovchick, Larisa
Sadasivam, Subhashini
Florens, Laurence
Zhu, Xiaopeng
Swanson, Selene K.
Velmurugan, Soundarapandian
Chen, Runsheng
Washburn, Michael P.
Liu, X. Shirley
DeCaprio, James A.
机构
[1] Harvard Univ, Sch Med, Dept Med Oncol, Dana Farber Canc Inst, Boston, MA 02115 USA
[2] Harvard Univ, Sch Med, Dept Med, Brigham & Womens Hosp, Boston, MA 02115 USA
[3] Stowers Inst Med Res, Kansas City, MO 64110 USA
[4] Chinese Acad Sci, Inst Biophys, Bioinformat Lab, Beijing 100101, Peoples R China
[5] Harvard Univ, Sch Med, Dept Canc Biol, Dana Farber Canc Inst, Boston, MA 02115 USA
[6] Harvard Univ, Sch Med, Dept Biostat & Computat Biol, Dana Farber Canc Inst, Boston, MA 02115 USA
[7] Harvard Univ, Sch Publ Hlth, Dept Biostat, Boston, MA 02115 USA
关键词
D O I
10.1016/j.molcel.2007.04.015
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The mammalian Retinoblastoma (1313) family including pRB, p107, and p130 represses E2F target genes through mechanisms that are not fully understood. In D. melanogaster, RB-dependent repression is mediated in part by the multisubunit protein complex Drosophila RBF, E2F, and Myb (dREAM) that contains homologs of the C. elegans synthetic multivulva class B (synMuvB) gene products. Using an integrated approach combining proteomics, genomics, and bioinformatic analyses, we identified a p130 complex termed DIP, RB-like, E2F, and MuvB (DREAM) that contains mammalian homologs of synMuvB proteins LIN-9, LIN-37, LIN-52, LIN-54, and LIN-53/RBBP4. DREAM bound to more than 800 human promoters in GO and was required for repression of E2F target genes. In S phase, MuvB proteins dissociated from p130 and formed a distinct submodule that bound MYB. This work reveals an evolutionarily conserved multisubunit protein complex that contains p130 and E2F4, but not pRB, and mediates the repression of cell cycle-dependent genes in quiescence.
引用
收藏
页码:539 / 551
页数:13
相关论文
共 40 条
[21]   Inhibition of oncogenic transformation by mammalian Lin-9, a pRB-associated protein [J].
Gagrica, S ;
Hauser, S ;
Kolfschoten, I ;
Osterloh, L ;
Agami, R ;
Gaubatz, S .
EMBO JOURNAL, 2004, 23 (23) :4627-4638
[22]   Some C. elegans class B synthetic multivulva proteins encode a conserved LIN-35 Rb-containing complex distinct from a NuRD-like complex [J].
Harrison, Melissa M. ;
Ceol, Craig J. ;
Lu, Xiaowei ;
Horvitz, H. Robert .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (45) :16782-16787
[23]   Exploration, normalization, and summaries of high density oligonucleotide array probe level data [J].
Irizarry, RA ;
Hobbs, B ;
Collin, F ;
Beazer-Barclay, YD ;
Antonellis, KJ ;
Scherf, U ;
Speed, TP .
BIOSTATISTICS, 2003, 4 (02) :249-264
[24]   CEAS:: cis-regulatory element annotation system [J].
Ji, Xuwo ;
Li, Wei ;
Song, Jun ;
Wei, Liping ;
Liu, X. Shirley .
NUCLEIC ACIDS RESEARCH, 2006, 34 :W551-W554
[25]   Model-based analysis of tiling-arrays for ChIP-chip [J].
Johnson, W. Evan ;
Li, Wei ;
Meyer, Clifford A. ;
Gottardo, Raphael ;
Carroll, Jason S. ;
Brown, Myles ;
Liu, X. Shirley .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (33) :12457-12462
[26]   Native E2F/RBF complexes contain Myb-interacting proteins and repress transcription of developmentally controlled E2F target genes [J].
Korenjak, M ;
Taylor-Harding, B ;
Binné, UK ;
Satterlee, JS ;
Stevaux, O ;
Aasland, R ;
White-Cooper, H ;
Dyson, N ;
Brehm, A .
CELL, 2004, 119 (02) :181-193
[27]   Identification of a Drosophila Myb-E2F2/RBF transcriptional repressor complex [J].
Lewis, PW ;
Beall, EL ;
Fleischer, TC ;
Georlette, D ;
Link, AJ ;
Botchan, MR .
GENES & DEVELOPMENT, 2004, 18 (23) :2929-2940
[28]   Glycogen synthase kinase 3 phosphorylates RBL2/p130 during quiescence [J].
Litovchick, L ;
Chestukhin, A ;
DeCaprio, JA .
MOLECULAR AND CELLULAR BIOLOGY, 2004, 24 (20) :8970-8980
[29]   The human synMuv-like protein LIN-9 is required for transcription of G2/M genes and for entry into mitosis [J].
Osterloh, Lisa ;
von Eyss, Bjoern ;
Schmit, Fabienne ;
Rein, Lena ;
Huebner, Denise ;
Samans, Birgit ;
Hauser, Stefanie ;
Gaubatz, Stefan .
EMBO JOURNAL, 2007, 26 (01) :144-157
[30]   Histone trimethylation and the maintenance of transcriptional ON and OFF states by trxG and PcG proteins [J].
Papp, Bernadett ;
Mueller, Juerg .
GENES & DEVELOPMENT, 2006, 20 (15) :2041-2054