A first-generation whole genome radiation hybrid map spanning the mouse genome

被引:157
作者
McCarthy, LC
Terrett, J
Davis, ME
Knights, CJ
Smith, AL
Critcher, R
Schmitt, K
Hudson, J
Spurr, NK
Goodfellow, PN
机构
[1] Univ Cambridge, Dept Genet, Cambridge CB2 3EH, England
[2] SmithKline Beecham Pharmaceut, Harlow CM19 5AW, Essex, England
[3] Millenium Pharmaceut, Cambridge, MA 02139 USA
[4] Res Genet Inc, Huntsville, AL 35801 USA
来源
GENOME RESEARCH | 1997年 / 7卷 / 12期
关键词
D O I
10.1101/gr.7.12.1153
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We have assembled a first-generation anchor map of the mouse genome using a panel of 94 whole-genome-radiation hybrids (WG-RHs) and 271 sequence-tagged sites (STSs). This is the first genome-wide RH anchor map of a model organism. All of the STSs have been previously localized on the genetic map and are located 8.8 Mb apart on average. This mouse WG-RH panel, known as T31, has an average retention frequency of 27.6% and an estimated potential resolution of 145 kb, making it a powerful resource for efficient large-scale expressed sequence tag mapping.
引用
收藏
页码:1153 / 1161
页数:9
相关论文
共 23 条
  • [1] Functional identification of the mouse circadian Clock gene by transgenic BAC rescue
    Antoch, MP
    Song, EJ
    Chang, AM
    Vitaterna, MH
    Zhao, YL
    Wilsbacher, LD
    Sangoram, AM
    King, DP
    Pinto, LH
    Takahashi, JS
    [J]. CELL, 1997, 89 (04) : 655 - 667
  • [2] BOEHNKE M, 1991, AM J HUM GENET, V49, P1174
  • [3] TOWARDS HIGH-RESOLUTION MAPS OF THE MOUSE AND HUMAN GENOMES - A FACILITY FOR ORDERING MARKERS TO 0.1 CM RESOLUTION
    BREEN, M
    DEAKIN, L
    MACDONALD, B
    MILLER, S
    SIBSON, R
    TARTTELIN, E
    AVNER, P
    BOURGADE, F
    GUENET, JL
    MONTAGUTELLI, X
    POIRIER, C
    SIMON, D
    TAILOR, D
    BISHOP, M
    KELLY, M
    RYSAVY, F
    RASTAN, S
    NORRIS, D
    SHEPHERD, D
    ABBOTT, C
    PILZ, A
    HODGE, S
    JACKSON, I
    BOYD, Y
    BLAIR, H
    MASLEN, G
    TODD, JA
    REED, PW
    STOYE, J
    ASHWORTH, A
    MCCARTHY, L
    COX, R
    SCHALKWYK, L
    LEHRACH, H
    KLOSE, J
    GANGADHARAN, U
    BROWN, S
    [J]. HUMAN MOLECULAR GENETICS, 1994, 3 (04) : 621 - 627
  • [4] Genomic organization of the mottled gene, the mouse homologue of the human menkes disease gene
    Cecchi, C
    Avner, P
    [J]. GENOMICS, 1996, 37 (01) : 96 - 104
  • [5] A GENETIC-MAP OF THE MOUSE WITH 4,006 SIMPLE SEQUENCE LENGTH POLYMORPHISMS
    DIETRICH, WF
    MILLER, JC
    STEEN, RG
    MERCHANT, M
    DAMRON, D
    NAHF, R
    GROSS, A
    JOYCE, DC
    WESSEL, M
    DREDGE, RD
    MARQUIS, A
    STEIN, LD
    GOODMAN, N
    PAGE, DC
    LANDER, ES
    [J]. NATURE GENETICS, 1994, 7 (02) : 220 - 245
  • [6] NEW METHOD FOR MAPPING GENES IN HUMAN CHROMOSOMES
    GOSS, SJ
    HARRIS, H
    [J]. NATURE, 1975, 255 (5511) : 680 - 684
  • [7] A radiation hybrid map of the human genome
    Gyapay, G
    Schmitt, K
    Fizames, C
    Jones, H
    VegaCzarny, N
    Spillett, D
    Muselet, D
    PrudHomme, JF
    Dib, C
    Auffray, C
    Morissette, J
    Weissenbach, J
    Goodfellow, PN
    [J]. HUMAN MOLECULAR GENETICS, 1996, 5 (03) : 339 - 346
  • [8] AN STS-BASED MAP OF THE HUMAN GENOME
    HUDSON, TJ
    STEIN, LD
    GERETY, SS
    MA, JL
    CASTLE, AB
    SILVA, J
    SLONIM, DK
    BAPTISTA, R
    KRUGLYAK, L
    XU, SH
    HU, XT
    COLBERT, AME
    ROSENBERG, C
    REEVEDALY, MP
    ROZEN, S
    HUI, L
    WU, XY
    VESTERGAARD, C
    WILSON, KM
    BAE, JS
    MAITRA, S
    GANIATSAS, S
    EVANS, CA
    DEANGELIS, MM
    INGALLS, KA
    NAHF, RW
    HORTON, LT
    ANDERSON, MO
    COLLYMORE, AJ
    YE, WJ
    KOUYOUMJIAN, V
    ZEMSTEVA, IS
    TAM, J
    DEVINE, R
    COURTNEY, DF
    RENAUD, MT
    NGUYEN, H
    OCONNOR, TJ
    FIZAMES, C
    FAURE, S
    GYAPAY, G
    DIB, C
    MORISSETTE, J
    ORLIN, JB
    BIRREN, BW
    GOODMAN, N
    WEISSENBACH, J
    HAWKINS, TL
    FOOTE, S
    PAGE, DC
    [J]. SCIENCE, 1995, 270 (5244) : 1945 - 1954
  • [9] Identification and characterization of the mouse obesity gene tubby: A member of a novel gene family
    Kleyn, PW
    Fan, W
    Kovats, SG
    Lee, JJ
    Pulido, JC
    Wu, Y
    Berkemeier, LR
    Misumi, DJ
    Holmgren, L
    Charlat, O
    Woolf, EA
    Tayber, O
    Brody, T
    Shu, P
    Hawkins, F
    Kennedy, B
    Baldini, L
    Ebeling, C
    Alperin, GD
    Deeds, J
    Lakey, ND
    Culpepper, J
    Chen, H
    GlucksmannKuis, MA
    Carlson, GA
    Duyk, GM
    Moore, KJ
    [J]. CELL, 1996, 85 (02) : 281 - 290
  • [10] Mapping of mammalian genomes with radiation (Goss and Harris) hybrids
    Leach, RJ
    OConnell, P
    [J]. ADVANCES IN GENETICS, VOL 33, 1995, 33 : 63 - 99