Functions of human DNA polymerases η, κ and ι suggested by their properties, including fidelity with undamaged DNA templates

被引:110
作者
Kunkel, TA [1 ]
Pavlov, YI
Bebenek, K
机构
[1] NIEHS, Mol Genet Lab, Res Triangle Pk, NC 27709 USA
[2] NIEHS, Struct Biol Lab, Res Triangle Pk, NC 27709 USA
关键词
Y-family DNA polymerases; DNA replication fidelity; somatic hypermutation;
D O I
10.1016/S1568-7864(02)00224-0
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Human DNA polymerases eta, kappa and iota are template-dependent, Y-family DNA polymerases that have been implicated in translesion DNA synthesis (TLS) in human cells. Here, we briefly review evidence that these exonuclease-deficient polymerases copy undamaged DNA with very low fidelity and unusual error specificity. Based on the base substitution specificity and other biochemical properties of DNA polymerases eta and iota, we consider the possibility that they participate in specialized DNA transactions that repair damaged DNA and/or generate mutations in the variable regions of immunoglobulin genes. Published by Elsevier Science B.V.
引用
收藏
页码:135 / 149
页数:15
相关论文
共 102 条
[1]   ESCHERICHIA-COLI MUTY GENE ENCODES AN ADENINE GLYCOSYLASE ACTIVE ON G-A MISPAIRS [J].
AU, KG ;
CLARK, S ;
MILLER, JH ;
MODRICH, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1989, 86 (22) :8877-8881
[2]   Enzyme-DNA interactions required for efficient nucleotide incorporation and discrimination in human DNA polymerase beta [J].
Beard, WA ;
Osheroff, WP ;
Prasad, R ;
Sawaya, MR ;
Jaju, M ;
Wood, TG ;
Kraut, J ;
Kunkel, TA ;
Wilson, SH .
JOURNAL OF BIOLOGICAL CHEMISTRY, 1996, 271 (21) :12141-12144
[3]   Loss of DNA polymerase β stacking interactions with templating purines, but not pyrimidines, alters catalytic efficiency and fidelity [J].
Beard, WA ;
Shock, DD ;
Yang, XP ;
DeLauder, SF ;
Wilson, SH .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (10) :8235-8242
[4]   DNA lesion bypass polymerases open up [J].
Beard, WA ;
Wilson, SH .
STRUCTURE, 2001, 9 (09) :759-764
[5]   Family growth: the eukaryotic DNA polymerase revolution [J].
Bebenek, K ;
Kunkel, TA .
CELLULAR AND MOLECULAR LIFE SCIENCES, 2002, 59 (01) :54-57
[6]   Streisinger revisited: DNA synthesis errors mediated by substrate misalignments [J].
Bebenek, K ;
Kunkel, TA .
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 2000, 65 :81-91
[7]   5′-Deoxyribose phosphate lyase activity of human DNA polymerase ι in vitro [J].
Bebenek, K ;
Tissier, A ;
Frank, EG ;
McDonald, JP ;
Prasad, R ;
Wilson, SH ;
Woodgate, R ;
Kunkel, TA .
SCIENCE, 2001, 291 (5511) :2156-2159
[8]   Proofreading of DNA polymerase η-dependent replication errors [J].
Bebenek, K ;
Matsuda, T ;
Masutani, C ;
Hanaoka, F ;
Kunkel, TA .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2001, 276 (04) :2317-2320
[9]   Release of normal bases from intact DNA by a native DNA repair enzyme [J].
Berdal, KG ;
Johansen, RF ;
Seeberg, E .
EMBO JOURNAL, 1998, 17 (02) :363-367
[10]   Cutting edge:: DNA polymerases μ and λ are dispensable for Ig gene hypermutation [J].
Bertocci, B ;
De Smet, A ;
Flatter, E ;
Dahan, A ;
Bories, JC ;
Landreau, C ;
Weill, JC ;
Reynaud, CA .
JOURNAL OF IMMUNOLOGY, 2002, 168 (08) :3702-3706