Can the nonadiabatic photodynamics of aminopyrimidine be a model for the ultrafast deactivation of adenine?

被引:63
作者
Barbatti, Mario [1 ]
Lischka, Hans [1 ]
机构
[1] Univ Vienna, Inst Theoret Chem, A-1090 Vienna, Austria
关键词
D O I
10.1021/jp070089w
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
The reaction path for the ultrafast deactivation of 6-aminopyrimidine (6AP) has been investigated by means of ab initio surface-hopping dynamics. The electronic vertical excitation spectrum, excited-state S-1 minima, and minima on the crossing seam of 6AP resemble well those found for adenine. The deactivation from the S-1 to the S-0 state takes place at the ultrafast time scale of 400 fs and involves the out-of-plane ring deformation of the C-4 atom, a position that is sterically restricted in adenine by the imidazole ring. Mechanical restrictions have been used to simulate in a simple way the role of the imidazole group in adenine. As a result, deactivation via out-of-plane ring deformation of the C-2 and N-3 atoms are observed in good agreement with predictions for adenine. These dynamics results show that the previously suggested ring puckering deactivation paths really exist at a time scale, which is compatible with experimentally observed life times. The electronic structure of the crossing seam has been shown to have the same nature as those of simple biradicaloid systems, a feature which seems to be valid for any cyclic system.
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收藏
页码:2852 / 2858
页数:7
相关论文
共 66 条
[51]   An ab initio study of the excited states, isomerization energy profiles and conical intersections of a chiral cyclohexylidene derivative [J].
Schreiber, Marko ;
Barbatti, Mario ;
Zilberg, Shmuel ;
Lischka, Hans ;
Gonzalez, Leticia .
JOURNAL OF PHYSICAL CHEMISTRY A, 2007, 111 (02) :238-243
[52]   Efficient deactivation of a model base pair via excited-state hydrogen transfer [J].
Schultz, T ;
Samoylova, E ;
Radloff, W ;
Hertel, IV ;
Sobolewski, AL ;
Domcke, W .
SCIENCE, 2004, 306 (5702) :1765-1768
[53]   Adenine and 2-aminopurine:: Paradigms of modern theoretical photochemistry [J].
Serrano-Andres, Luis ;
Merchan, Manuela ;
Borin, Antonio C. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2006, 103 (23) :8691-8696
[54]  
SHEPARD R, 1988, INT J QUANTUM CHEM, P149
[55]   A GENERAL MULTIREFERENCE CONFIGURATION-INTERACTION GRADIENT PROGRAM [J].
SHEPARD, R ;
LISCHKA, H ;
SZALAY, PG ;
KOVAR, T ;
ERNZERHOF, M .
JOURNAL OF CHEMICAL PHYSICS, 1992, 96 (03) :2085-2098
[56]  
Shepard R., 1995, MODERN ELECT STRUC 1, P345
[57]   ABINITIO INVESTIGATION OF POTENTIAL-ENERGY SURFACES INVOLVED IN THE PHOTOPHYSICS OF BENZENE AND PYRAZINE [J].
SOBOLEWSKI, AL ;
WOYWOD, C ;
DOMCKE, W .
JOURNAL OF CHEMICAL PHYSICS, 1993, 98 (07) :5627-5641
[58]   On the mechanism of nonradiative decay of DNA bases: ab initio and TDDFT results for the excited states of 9H-adenine [J].
Sobolewski, AL ;
Domcke, W .
EUROPEAN PHYSICAL JOURNAL D, 2002, 20 (03) :369-374
[59]   A COMPUTER-SIMULATION METHOD FOR THE CALCULATION OF EQUILIBRIUM-CONSTANTS FOR THE FORMATION OF PHYSICAL CLUSTERS OF MOLECULES - APPLICATION TO SMALL WATER CLUSTERS [J].
SWOPE, WC ;
ANDERSEN, HC ;
BERENS, PH ;
WILSON, KR .
JOURNAL OF CHEMICAL PHYSICS, 1982, 76 (01) :637-649
[60]   Excited state direct dynamics of benzene with reparameterized multi-reference semiempirical configuration interaction methods [J].
Toniolo, A ;
Thompson, AL ;
Martínez, TJ .
CHEMICAL PHYSICS, 2004, 304 (1-2) :133-145