RECODE 2003

被引：52

作者：

Baranov, PV ^{[1
]}

Gurvich, OL ^{[1
]}

Hammer, AW ^{[1
]}

Gesteland, RF ^{[1
]}

Atkins, JF ^{[1
]}

机构：

[1] Univ Utah, Dept Human Genet, Salt Lake City, UT 84112 USA

来源：

NUCLEIC ACIDS RESEARCH | 2003年 / 31卷 / 01期

关键词：

D O I：

10.1093/nar/gkg024

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 [生物化学与分子生物学]; 081704 [应用化学];

摘要：

The RECODE database is a compilation of translational recoding events (programmed ribosomal frameshifting, codon redefinition and translational bypass). The database provides information about the genes utilizing these events for their expression, recoding sites, stimulatory sequences and other relevant information. The Database is freely available at http://recode.genetics.utah.edu/.

引用

页码：87 / 89

页数：3

共 21 条

[1]

SsrA-mediated tagging and proteolysis of Lacl and its role in the regulation of lac operon [J].

Abo, T ;

Inada, T ;

Ogawa, A ;

Aiba, H .

EMBO JOURNAL, 2000, 19 (14) :3762-3769

[2]

Biochemistry - The 22nd amino acid [J].

Atkins, JF ;

Gesteland, R .

SCIENCE, 2002, 296 (5572) :1409-1410

[3]

Overriding standard decoding:: Implications of recoding for ribosome function and enrichment of gene expression [J].

Atkins, JF ;

Baranov, PV ;

Fayet, O ;

Herr, AJ ;

Howard, MT ;

Ivanov, IP ;

Matsufuji, S ;

Miller, WA ;

Moore, B ;

Prère, MF ;

Willis, NM ;

Zhou, J ;

Gesteland, RF .

COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 2001, 66 :217-232

[4]

Recoding: translational bifurcations in gene expression [J].

Baranov, PV ;

Gesteland, RF ;

Atkins, JF .

GENE, 2002, 286 (02) :187-201

[5]

RECODE:: a database of frameshifting, bypassing and codon redefinition utilized for gene expression [J].

Baranov, PV ;

Gurvich, OL ;

Fayet, O ;

Prère, MF ;

Miller, WA ;

Gesteland, RF ;

Atkins, JF ;

Giddings, MC .

NUCLEIC ACIDS RESEARCH, 2001, 29 (01) :264-267

[6]

BARANOV PV, 2002, UNPUB J MOL BIOL

[7]

A-1 ribosomal frameshift element that requires base pairing across four kilobases suggests a mechanism of regulating ribosome and replicase traffic on a viral RNA [J].

Barry, JK ;

Miller, WA .

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2002, 99 (17) :11133-11138

[8]

Structure and function of the stimulatory RNAs involved in programmed eukaryotic-1 ribosomal frameshifting [J].

Brierley, I ;

Pennell, S .

COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY, 2001, 66 :233-248

[9]

Local and distant sequences are required for efficient readthrough of the barley yellow dwarf virus PAV coat protein gene stop codon [J].

Brown, CM ;

DineshKumar, SP ;

Miller, WA .

JOURNAL OF VIROLOGY, 1996, 70 (09) :5884-5892

[10]

Competition between SsrA tagging and translational termination at weak stop codons in Escherichia coli [J].

Collier, J ;

Binet, E ;

Bouloc, P .

MOLECULAR MICROBIOLOGY, 2002, 45 (03) :745-754

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