CONFORMATION OF BETA-METHYLMELIBIOSE BOUND TO THE RICIN B-CHAIN AS DETERMINED FROM TRANSFERRED NUCLEAR OVERHAUSER EFFECTS

被引:49
作者
BEVILACQUA, VL [1 ]
KIM, YM [1 ]
PRESTEGARD, JH [1 ]
机构
[1] YALE UNIV, DEPT CHEM, NEW HAVEN, CT 06511 USA
关键词
D O I
10.1021/bi00154a003
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Transferred nuclear Overhauser effect (TRNOE) experiments have revealed a change in the torsion angles about the alpha- 1-6 glycosidic bond of methyl beta-melibioside upon binding of the melibioside to the ricin B-chain (Rb). A full relaxation rate matrix simulation of experimental buildup curves aided in quantitative interpretation of 1D selective inversion recovery TRNOE experiments. The data are consistent with a model in which both major (omega almost-equal-to 170-degrees) and minor (omega almost-equal-to -60-degrees) conformers for methyl beta-melibioside are significantly populated in solution while the Rb/methyl beta-melibioside complex has little of the minor conformer populated. The results indicate that the ricin B-chain excludes binding of certain ligand conformations on the basis of unfavorable interactions between the protein surface and remote portions of the disaccharide system.
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页码:9339 / 9349
页数:11
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