MULTIBILAYER STRUCTURE OF DIMYRISTOYLPHOSPHATIDYLCHOLINE DIHYDRATE AS DETERMINED BY ENERGY MINIMIZATION

被引:37
作者
VANDERKOOI, G
机构
[1] Department of Chemistry, Northern Illinois University, DeKalb
关键词
D O I
10.1021/bi00108a022
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Complete energy minimization was carried Out on the multibilayer crystal structure of 1,2-dimyristoyl-sn-glycero-3-phosphocholine dihydrate (DMPC.2H2O), starting from the X-ray structure determination reported by Pearson and Pascher (1979) Nature 281, 499-501. The asymmetric unit contains two nonidentical DMPC molecules and four water molecules. Minimization removed the acyl chain disorder present in the X-ray structure and caused the carbon planes of the acyl chains to become mutually parallel. Two energy-minimized structures (structures I and II) were found which mainly differed in the hydrogen-bonding arrangement of the waters of hydration. In structure I as in the X-ray structure, one of the water molecules forms a hydrogen-bonded bridge between successive bilayers; but in structure II, all hydrogen bonds are satisfied on the same bilayer. Structure II corresponds to the global energy minimum and is also a suitable structure for single bilayers. The lattice constants and cell volume of the minimized structures are close to the experimental values. The electrostatic force between DMPC bilayers is attractive. The mean hydration energy of the water is -14.2 kcal/mol, which is 2.5 kcal/mol lower than the binding energy of ice.
引用
收藏
页码:10760 / 10768
页数:9
相关论文
共 41 条
[11]   PREFERRED CONFORMATION AND DYNAMICS OF THE GLYCEROL BACKBONE IN PHOSPHOLIPIDS - AN NMR AND X-RAY SINGLE-CRYSTAL ANALYSIS [J].
HAUSER, H ;
PASCHER, I ;
SUNDELL, S .
BIOCHEMISTRY, 1988, 27 (26) :9166-9174
[12]   PREFERRED CONFORMATION AND MOLECULAR PACKING OF PHOSPHATIDYLETHANOLAMINE AND PHOSPHATIDYLCHOLINE [J].
HAUSER, H ;
PASCHER, I ;
PEARSON, RH ;
SUNDELL, S .
BIOCHIMICA ET BIOPHYSICA ACTA, 1981, 650 (01) :21-51
[13]   STRUCTURAL CHEMISTRY OF 1,2 DILAUROYL-DL-PHOSPHATIDYLETHANOLAMINE - MOLECULAR-CONFORMATION AND INTERMOLECULAR PACKING OF PHOSPHOLIPIDS [J].
HITCHCOCK, PB ;
MASON, R ;
THOMAS, KM ;
SHIPLEY, GG .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1974, 71 (08) :3036-3040
[14]   THEORETICAL CONFORMATIONAL-ANALYSIS OF PHOSPHOLIPIDS .1. STUDY OF THE INTERACTIONS BETWEEN PHOSPHOLIPID MOLECULES BY USE OF SEMI-EMPIRICAL METHODS WITH THE EXPLICIT INTRODUCTION OF POLAR HEADGROUP INTERACTIONS [J].
KREISSLER, M ;
LEMAIRE, B ;
BOTHOREL, P .
BIOCHIMICA ET BIOPHYSICA ACTA, 1983, 735 (01) :12-22
[15]   THERMAL ANALYSIS OF LIPIDS, PROTEINS AND BIOLOGICAL MEMBRANES . A REVIEW AND SUMMARY OF SOME RECENT STUDIES [J].
LADBROOKE, BD ;
CHAPMAN, D .
CHEMISTRY AND PHYSICS OF LIPIDS, 1969, 3 (04) :304-+
[16]  
LIS LJ, 1982, BIOPHYS J, V37, P657
[17]   POTENTIAL-ENERGY CALCULATIONS ON PHOSPHOLIPIDS - PREFERRED CONFORMATIONS WITH INTRAMOLECULAR STACKING AND MUTUALLY TILTED HYDROCARBON CHAIN PLANES [J].
MCALISTER, J ;
YATHINDRA, N ;
SUNDARALINGAM, M .
BIOCHEMISTRY, 1973, 12 (06) :1189-1195
[18]   STERIC REPULSION BETWEEN PHOSPHATIDYLCHOLINE BILAYERS [J].
MCINTOSH, TJ ;
MAGID, AD ;
SIMON, SA .
BIOCHEMISTRY, 1987, 26 (23) :7325-7332
[19]   INTERMOLECULAR POTENTIALS FROM CRYSTAL DATA .3. DETERMINATION OF EMPIRICAL POTENTIALS AND APPLICATION TO PACKING CONFIGURATIONS AND LATTICE ENERGIES IN CRYSTALS OF HYDROCARBONS, CARBOXYLIC-ACIDS, AMINES, AND AMIDES [J].
MOMANY, FA ;
CARRUTHERS, LM ;
MCGUIRE, RF ;
SCHERAGA, HA .
JOURNAL OF PHYSICAL CHEMISTRY, 1974, 78 (16) :1595-1620
[20]   INTERMOLECULAR POTENTIALS FROM CRYSTAL DATA .5. DETERMINATION OF EMPIRICAL POTENTIALS FOR O-H...O HYDROGEN-BONDS FROM PACKING CONFIGURATIONS AND LATTICE ENERGIES OF POLYHYDRIC ALCOHOLS [J].
NEMETHY, G ;
SCHERAGA, HA .
JOURNAL OF PHYSICAL CHEMISTRY, 1977, 81 (09) :928-931