ELECTRON-DENSITY MAPS OF LYSOZYME CALCULATED USING SYNCHROTRON LAUE DATA COMPRISING SINGLES AND DECONVOLUTED MULTIPLES

被引:15
作者
CAMPBELL, JW
DEACON, A
HABASH, J
HELLIWELL, JR
MCSWEENEY, S
QUAN, H
RAFTERY, J
SNELL, E
机构
[1] UNIV MANCHESTER,DEPT CHEM,MANCHESTER M13 9PL,LANCS,ENGLAND
[2] SERC,DARESBURY LAB,DARESBURY LAB,WARRINGTON WA4 4AD,CHESHIRE,ENGLAND
关键词
SYNCHROTRON RADIATION; LAUE DIFFRACTION; HEN EGG-WHITE LYSOZYME; IMAGE PLATE; X-PLOR; ELECTRON DENSITY; AMINO ACIDS;
D O I
10.1007/BF02747629
中图分类号
T [工业技术];
学科分类号
08 ;
摘要
We have used lysozyme as a test case to illustrate the application of a new method of estimating the intensities of Laue multiples reflection data in protein crystallography. Hen egg-white lysozyme, an enzyme with a single polypeptide chain 129 amino acids, crystallizes in space group P4(3)2(1)2 with cell parameters a = b 79.1 angstrom, c = 37.9 angstrom. Laue image plate data were collected using synchrotron radiation on station 9.5 at Daresbury with a total exposure time of 0.95 seconds. The data processed were separated into two data sets comprising the singles and the combined singles and deconvoluted multiples. The method of deconvolution was that of Campbell and Hao (1993), which utilizes the intensity variation of the lambda-curve. Electron density maps (2F(o) - F(c)) based on the two data sets are then compared. This comparison shows that the deconvoluted multiples do indeed contribute usefully to the continuity of the maps due to the improved completeness of the data. A number of map sections along the polypeptide chain, based on the two Laue data sets, are shown for comparison. These include Arg 5, His 15, Phe 38, Asp 52, Tyr 53, Pro 70, Trp 108 and the four disulphide bridges.
引用
收藏
页码:1 / 18
页数:18
相关论文
共 28 条
[1]   TIME-RESOLVED SYNCHROTRON LAUE DIFFRACTION AND ITS APPLICATION IN STRUCTURAL MOLECULAR-BIOLOGY AND MATERIALS SCIENCE [J].
ALLINSON, NM ;
CARR, PD ;
COLAPIETRO, M ;
HARDING, MM ;
HELLIWELL, JR ;
THOMPSON, AW ;
WEISGERBER, S .
PHASE TRANSITIONS, 1992, 39 (1-4) :145-160
[2]   IMAGING PLATE ILLUMINATES MANY FIELDS [J].
AMEMIYA, Y ;
MIYAHARA, J .
NATURE, 1988, 336 (6194) :89-90
[3]  
Amemiya Y., 1990, SYNCHROTRON RAD NEWS, V3, P21, DOI [10.1080/08940889008602552, DOI 10.1080/08940889008602552]
[4]   NOW YOU SEE IT, NOW YOU DONT [J].
BLOW, D .
CURRENT BIOLOGY, 1993, 3 (04) :204-207
[5]   A NEW PROTEIN CRYSTALLOGRAPHY STATION ON THE SRS WIGGLER BEAMLINE FOR VERY RAPID LAUE AND RAPIDLY TUNABLE MONOCHROMATIC EXPERIMENTS .1. DESIGN PRINCIPLES, RAY TRACING AND HEAT CALCULATIONS [J].
BRAMMER, RC ;
HELLIWELL, JR ;
LAMB, W ;
LILJAS, A ;
MOORE, PR ;
THOMPSON, AW ;
RATHBONE, KA .
NUCLEAR INSTRUMENTS & METHODS IN PHYSICS RESEARCH SECTION A-ACCELERATORS SPECTROMETERS DETECTORS AND ASSOCIATED EQUIPMENT, 1988, 271 (03) :678-687
[6]  
BRUNGER AT, 1990, X PLOR VERSION 2 2 M
[7]   DISTAL POCKET POLARITY IN LIGAND-BINDING TO MYOGLOBIN - DEOXY AND CARBONMONOXY FORMS OF A THREONINE(68)(E11) MUTANT INVESTIGATED BY X-RAY CRYSTALLOGRAPHY AND INFRARED-SPECTROSCOPY [J].
CAMERON, AD ;
SMERDON, SJ ;
WILKINSON, AJ ;
HABASH, J ;
HELLIWELL, JR ;
LI, TS ;
OLSON, JS .
BIOCHEMISTRY, 1993, 32 (48) :13061-13070
[8]   EVALUATION OF REFLECTION INTENSITIES FOR THE COMPONENTS OF MULTIPLE LAUE DIFFRACTION SPOTS .2. USING THE WAVELENGTH-NORMALIZATION CURVE [J].
CAMPBELL, JW ;
HAO, Q .
ACTA CRYSTALLOGRAPHICA SECTION A, 1993, 49 :889-893
[9]  
CAMPBELL JW, 1986, DARESBURY LABORATORY, P23
[10]   THE EMERGENCE OF THE SYNCHROTRON LAUE METHOD FOR RAPID DATA-COLLECTION FROM PROTEIN CRYSTALS [J].
CASSETTA, A ;
DEACON, A ;
EMMERICH, C ;
HABASH, J ;
HELLIWELL, JR ;
MCSWEENEY, S ;
SNELL, E ;
THOMPSON, AW ;
WEISGERBER, S .
PROCEEDINGS OF THE ROYAL SOCIETY-MATHEMATICAL AND PHYSICAL SCIENCES, 1993, 442 (1914) :177-192