THE DNA POLYMERASE-ENCODING GENE OF AFRICAN SWINE FEVER VIRUS - SEQUENCE AND TRANSCRIPTIONAL ANALYSIS

被引:31
作者
RODRIGUEZ, JM [1 ]
YANEZ, RJ [1 ]
RODRIGUEZ, JF [1 ]
VINUELA, E [1 ]
SALAS, ML [1 ]
机构
[1] UNIV AUTONOMA,CSIC,CTR BIOL MOLEC SEVERO OCHOA,E-28049 MADRID,SPAIN
关键词
DNA REPLICATION; APHIDICOLIN; SEQUENCE HOMOLOGY; GENE EXPRESSION; TRANSCRIPTION INITIATION;
D O I
10.1016/0378-1119(93)90453-A
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The putative DNA polymerase-encoding gene of African swine fever virus has been sequenced. The gene, designated G1207R, is located in the central region of the viral genome, and encodes a protein of 1207 amino acids (aa) with a predicted M(r) of 139 835. The gene is transcribed at both early and late stages of infection into a 4.1-kb RNA. Transcription is initiated at tsp, 8 nucleotides (nt) upstream from the start codon. Open reading frame (ORF) G1207R contains four direct repeats in tandem close to the 3'-end. Each repeat consists of 12 nt, coding for the reiterated sequence, K/NPAG. The deduced aa sequence of G1207R shows significant similarity with DNA polymerases from cellular and viral origin, belonging to the alpha-like family of DNA polymerases. In particular, the G1207R protein presents a colinear arrangement of all the 3'-->5' exonuclease and polymerization highly conserved aa regions characteristic of this group of DNA-dependent DNA polymerases.
引用
收藏
页码:103 / 110
页数:8
相关论文
共 51 条
[1]  
ALMAZAN F, 1993, J VIROL, V67, P553
[2]  
ALMAZAN F, 1992, J VIROL, V66, P6655
[3]  
BANKIER AT, 1984, TECHNIQUES LIFE SC B, V5, P1
[4]   STRUCTURAL AND FUNCTIONAL-RELATIONSHIPS BETWEEN PROKARYOTIC AND EUKARYOTIC DNA-POLYMERASES [J].
BERNAD, A ;
ZABALLOS, A ;
SALAS, M ;
BLANCO, L .
EMBO JOURNAL, 1987, 6 (13) :4219-4225
[5]   A CONSERVED 3'-]5' EXONUCLEASE ACTIVE-SITE IN PROKARYOTIC AND EUKARYOTIC DNA-POLYMERASES [J].
BERNAD, A ;
BLANCO, L ;
LAZARO, JM ;
MARTIN, G ;
SALAS, M .
CELL, 1989, 59 (01) :219-228
[6]   THE HIGHLY CONSERVED AMINO-ACID-SEQUENCE MOTIF TYR-GLY-ASP-THR-ASP-SER IN ALPHA-LIKE DNA-POLYMERASES IS REQUIRED BY PHAGE-PHI-29 DNA-POLYMERASE FOR PROTEIN-PRIMED INITIATION AND POLYMERIZATION [J].
BERNAD, A ;
LAZARO, JM ;
SALAS, M ;
BLANCO, L .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (12) :4610-4614
[7]   A GENERAL STRUCTURE FOR DNA-DEPENDENT DNA-POLYMERASES [J].
BLANCO, L ;
BERNAD, A ;
BLASCO, MA ;
SALAS, M .
GENE, 1991, 100 :27-38
[8]   EVIDENCE FAVORING THE HYPOTHESIS OF A CONSERVED 3'-5' EXONUCLEASE ACTIVE-SITE IN DNA-DEPENDENT DNA-POLYMERASES [J].
BLANCO, L ;
BERNAD, A ;
SALAS, M .
GENE, 1992, 112 (01) :139-144
[9]  
BLASCO MA, 1992, J BIOL CHEM, V267, P19427
[10]  
BLASCO MA, 1993, J BIOL CHEM, V268, P16763