HIGH-RESOLUTION COSMID AND P1-MAPS SPANNING THE 14-MB GENOME OF THE FISSION YEAST S-POMBE

被引:233
作者
HOHEISEL, JD
MAIER, E
MOTT, R
MCCARTHY, L
GRIGORIEV, AV
SCHALKWYK, LC
NIZETIC, D
FRANCIS, F
LEHRACH, H
机构
[1] Imperial Cancer Research Fund Lincoln's Inn Fields, London
关键词
D O I
10.1016/0092-8674(93)90164-L
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Gridded on high density filters, a P1 genomic library of 17-fold coverage and a cosmid library of 8 genome equivalents, both made from S. pombe strain 972h-, were ordered by hybridizing genetic markers and individual clones from the two libraries. Yeast artificial chromosome (YAC) clones covering the entire genome were used to subdivide the libraries, and hybridization of short oligonucleotides and DNA pools made from randomly selected cosmids provided further mapping information. Restriction digests were generated as an independent confirmation of the clone order. The high resolution clone map was aligned to the genetic map and the physical NotI and YAC maps. The usefulness of the various mapping techniques and cloning procedures could be assessed upon the different data sets.
引用
收藏
页码:109 / 120
页数:12
相关论文
共 35 条
[21]  
LEHRACH H., 1990, GENOME ANAL, P39
[22]   GENE DATABASE FOR THE FISSION YEAST SCHIZOSACCHAROMYCES-POMBE [J].
LENNON, GG ;
LEHRACH, H .
CURRENT GENETICS, 1992, 21 (01) :1-11
[23]   2 RELATED FAMILIES OF RETROTRANSPOSONS FROM SCHIZOSACCHAROMYCES-POMBE [J].
LEVIN, HL ;
WEAVER, DC ;
BOEKE, JD .
MOLECULAR AND CELLULAR BIOLOGY, 1990, 10 (12) :6791-6798
[24]   COMPLETE COVERAGE OF THE SCHIZOSACCHAROMYCES-POMBE GENOME IN YEAST ARTIFICIAL CHROMOSOMES [J].
MAIER, E ;
HOHEISEL, JD ;
MCCARTHY, L ;
MOTT, R ;
GRIGORIEV, AV ;
MONACO, AP ;
LARIN, Z ;
LEHRACH, H .
NATURE GENETICS, 1992, 1 (04) :273-277
[25]   AN AUTOMATED APPROACH TO GENERATING EXPRESSED SEQUENCE CATALOGS [J].
MEIEREWERT, S ;
MAIER, E ;
AHMADI, A ;
CURTIS, J ;
LEHRACH, H .
NATURE, 1993, 361 (6410) :375-376
[26]   CONSTRUCTION, ARRAYING, AND HIGH-DENSITY SCREENING OF LARGE INSERT LIBRARIES OF HUMAN CHROMOSOME-X AND CHROMOSOME-21 - THEIR POTENTIAL USE AS REFERENCE LIBRARIES [J].
NIZETIC, D ;
ZEHETNER, G ;
MONACO, AP ;
GELLEN, L ;
YOUNG, BD ;
LEHRACH, H .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (08) :3233-3237
[27]   THE COMPLETE DNA-SEQUENCE OF YEAST CHROMOSOME-III [J].
OLIVER, SG ;
VANDERAART, QJM ;
AGOSTONI-CARBONE, ML ;
AIGLE, M ;
ALBERGHINA, L ;
ALEXANDRAKI, D ;
ANTOINE, G ;
ANWAR, R ;
BALLESTA, JPG ;
BENIT, P ;
BERBEN, G ;
BERGANTINO, E ;
BITEAU, N ;
BOLLE, PA ;
BOLOTINFUKUHARA, M ;
BROWN, A ;
BROWN, AJP ;
BUHLER, JM ;
CARCANO, C ;
CARIGNANI, G ;
CEDERBERG, H ;
CHANET, R ;
CONTRERAS, R ;
CROUZET, M ;
DAIGNANFORNIER, B ;
DEFOOR, E ;
DELGADO, M ;
DEMOLDER, J ;
DOIRA, C ;
DUBOIS, E ;
DUJON, B ;
DUSTERHOFT, A ;
ERDMANN, D ;
ESTEBAN, M ;
FABRE, F ;
FAIRHEAD, C ;
FAYE, G ;
FELDMANN, H ;
FIERS, W ;
FRANCINGUESGAILLARD, MC ;
FRANCO, L ;
FRONTALI, L ;
FUKUHARA, H ;
FULLER, LJ ;
GALLAND, P ;
GENT, ME ;
GIGOT, D ;
GILLIQUET, V ;
GLANSDORFF, N ;
GOFFEAU, A .
NATURE, 1992, 357 (6373) :38-46
[28]   A COMMON LANGUAGE FOR PHYSICAL MAPPING OF THE HUMAN GENOME [J].
OLSON, M ;
HOOD, L ;
CANTOR, C ;
BOTSTEIN, D .
SCIENCE, 1989, 245 (4925) :1434-1435
[29]   A POSITIVE SELECTION VECTOR FOR CLONING HIGH-MOLECULAR-WEIGHT DNA BY THE BACTERIOPHAGE-P1 SYSTEM - IMPROVED CLONING EFFICACY [J].
PIERCE, JC ;
SAUER, B ;
STERNBERG, N .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (06) :2056-2060
[30]   TEMPERATURE-DEPENDENCE OF THE ACTIVITY OF DNA-MODIFYING ENZYMES - ENDONUCLEASES AND DNA-LIGASE [J].
POHL, FM ;
THOMAE, R ;
KARST, A .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1982, 123 (01) :141-152