CATALYSIS AT THE INTERFACE - THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE

被引:496
作者
DEREWENDA, U
BRZOZOWSKI, AM
LAWSON, DM
DEREWENDA, ZS
机构
[1] UNIV ALBERTA,DEPT BIOCHEM,MRC,PROT STRUCT & FUNCT GRP,EDMONTON T6G 2H7,ALBERTA,CANADA
[2] UNIV YORK,DEPT CHEM,YORK YO1 5DD,N YORKSHIRE,ENGLAND
[3] UNIV LODZ,INST CHEM,DEPT CRYSTALLOG,PL-91416 LODZ,POLAND
关键词
D O I
10.1021/bi00120a034
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The crystal structure of an extracellular triglyceride lipase (from a fungus Rhizomucor miehei) inhibited irreversibly by diethyl p-nitrophenyl phosphate (E600) was solved by X-ray crystallographic methods and refined to a resolution of 2.65 angstrom. The crystals are isomorphous with those of n-hexylphosphonate ethyl ester/lipase complex [Brzozowski, A. M., Derewenda, U., Derewenda, Z. S., Dodson, G. G., Lawson, D. M., Turkenburg, J. P., Bjorkling, F., Huge-Jensen, B., Patkar, S. A., & Thim, L. (1991) Nature 351, 491-494], where the conformational change was originally observed. The higher resolution of the present study allowed for a detailed analysis of the stereochemistry of the change observed in the inhibited enzyme. The movement of a 15 amino acid long "lid" (residues 82-96) is a hinge-type rigid-body motion which transports some of the atoms of a short alpha-helix (residues 85-91) by over 12 angstrom. There are two hinge regions (residues 83-84 and 91-95) within which pronounced transitions of secondary structure between alpha and beta-conformations are caused by dramatic changes of specific conformational dihedral angles (phi and psi). As a result of this change a hydrophobic area of ca. 800 angstrom 2 (8% of the total molecule surface) becomes exposed. Other triglyceride lipases are also known to have "lids' similar to the one observed in the R. miehei enzyme, and it is possible that the general stereochemistry of lipase activation at the oil-water interfaces inferred from the present X-ray study is likely to apply to the entire family of lipases.
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页码:1532 / 1541
页数:10
相关论文
共 33 条
  • [1] STRUCTURAL AND FUNCTIONAL-ASPECTS OF DOMAIN MOTIONS IN PROTEINS
    BENNETT, WS
    HUBER, R
    [J]. CRC CRITICAL REVIEWS IN BIOCHEMISTRY, 1984, 15 (04): : 291 - 384
  • [2] ROLE OF A BURIED ACID GROUP IN MECHANISM OF ACTION OF CHYMOTRYPSIN
    BLOW, DM
    BIRKTOFT, JJ
    HARTLEY, BS
    [J]. NATURE, 1969, 221 (5178) : 337 - &
  • [3] RHIZOMUCOR-MIEHEI TRIGLYCERIDE LIPASE IS SYNTHESIZED AS A PRECURSOR
    BOEL, E
    HUGEJENSEN, B
    CHRISTENSEN, M
    THIM, L
    FIIL, NP
    [J]. LIPIDS, 1988, 23 (07) : 701 - 706
  • [4] A SERINE PROTEASE TRIAD FORMS THE CATALYTIC CENTER OF A TRIACYLGLYCEROL LIPASE
    BRADY, L
    BRZOZOWSKI, AM
    DEREWENDA, ZS
    DODSON, E
    DODSON, G
    TOLLEY, S
    TURKENBURG, JP
    CHRISTIANSEN, L
    HUGEJENSEN, B
    NORSKOV, L
    THIM, L
    MENGE, U
    [J]. NATURE, 1990, 343 (6260) : 767 - 770
  • [5] A MODEL FOR INTERFACIAL ACTIVATION IN LIPASES FROM THE STRUCTURE OF A FUNGAL LIPASE-INHIBITOR COMPLEX
    BRZOZOWSKI, AM
    DEREWENDA, U
    DEREWENDA, ZS
    DODSON, GG
    LAWSON, DM
    TURKENBURG, JP
    BJORKLING, F
    HUGEJENSEN, B
    PATKAR, SA
    THIM, L
    [J]. NATURE, 1991, 351 (6326) : 491 - 494
  • [6] HYDROPHOBIC BONDING AND ACCESSIBLE SURFACE-AREA IN PROTEINS
    CHOTHIA, C
    [J]. NATURE, 1974, 248 (5446) : 338 - 339
  • [7] DATTA S, 1988, J BIOL CHEM, V263, P1107
  • [8] CALIBRATION TESTS AND USE OF A NICOLET XENTRONICS IMAGING PROPORTIONAL CHAMBER MOUNTED ON A CONVENTIONAL SOURCE FOR PROTEIN CRYSTALLOGRAPHY
    DEREWENDA, Z
    HELLIWELL, JR
    [J]. JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1989, 22 : 123 - 137
  • [9] DEREWENDA ZS, 1991, J BIOL CHEM, V266, P23112
  • [10] DEREWENDA ZS, 1991, IN PRESS BIOCH CELL