AN INTRONIC (A/U)GGG REPEAT ENHANCES THE SPLICING OF AN ALTERNATIVE INTRON OF THE CHICKEN BETA-TROPOMYOSIN PRE-MESSENGER-RNA

被引:106
作者
SIRANDPUGNET, P [1 ]
DUROSAY, P [1 ]
BRODY, E [1 ]
MARIE, J [1 ]
机构
[1] UNIV PARIS 06, CTR GENET MOLEC, CNRS, F-91190 GIF SUR YVETTE, FRANCE
关键词
D O I
10.1093/nar/23.17.3501
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Computer analysis of human intron sequences have revealed a 50 nucleotide (nt) GC-rich region down-stream of the 5' splice site; the trinucleotide GGG occurs almost four times as frequently as it would in a random sequence, The 5' part of a beta-tropomyosin intron exhibits six repetitions of the motif (A/U)GGG, In order to test whether these motifs play a role in the splicing process we have mutated some or all of them, Mutated RNAs show a lower in vitro splicing efficiency when compared with the wild-type, especially when all six motifs are mutated (>70% inhibition), Assembly of the spliceosome complex B and, to a lesser extent, of the pre-spliceosome complex A also appears to be strongly affected by this mutation, A 55 kDa protein within HeLa cell nuclear extract is efficiently cross-linked to the G-rich region, This protein is present in the splicing complexes and its cross-linking to the pre-mRNA requires the presence of one or several snRNP, Altogether our results suggest that the G-rich sequences present in the 5' part of introns may act as an enhancer of the splicing reaction at the level of spliceosome assembly.
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页码:3501 / 3507
页数:7
相关论文
共 34 条
[1]   RNA-BINDING SPECIFICITY OF HNRNP A1 - SIGNIFICANCE OF HNRNP A1 HIGH-AFFINITY BINDING-SITES IN PRE-MESSENGER-RNA SPLICING [J].
BURD, CG ;
DREYFUSS, G .
EMBO JOURNAL, 1994, 13 (05) :1197-1204
[2]   RECOMBINANT HNRNP PROTEIN A1 AND ITS N-TERMINAL DOMAIN SHOW PREFERENTIAL AFFINITY FOR OLIGODEOXYNUCLEOTIDES HOMOLOGOUS TO INTRON EXON ACCEPTOR SITES [J].
BUVOLI, M ;
COBIANCHI, F ;
BIAMONTI, G ;
RIVA, S .
NUCLEIC ACIDS RESEARCH, 1990, 18 (22) :6595-6600
[3]   REGULATION OF ALTERNATIVE SPLICING IN-VIVO BY OVEREXPRESSION OF ANTAGONISTIC SPLICING FACTORS [J].
CACERES, JF ;
STAMM, S ;
HELFMAN, DM ;
KRAINER, AR .
SCIENCE, 1994, 265 (5179) :1706-1709
[4]  
COBIANCHI F, 1988, J BIOL CHEM, V263, P1063
[5]   RNA SECONDARY STRUCTURE REPRESSION OF A MUSCLE-SPECIFIC EXON IN HELA-CELL NUCLEAR EXTRACTS [J].
DORVAL, BC ;
CARAFA, YD ;
SIRANDPUGNET, P ;
GALLEGO, M ;
BRODY, E ;
MARIE, J .
SCIENCE, 1991, 252 (5014) :1823-1828
[6]   G+C-RICH TRACT IN 5' END OF HUMAN INTRONS [J].
ENGELBRECHT, J ;
KNUDSEN, S ;
BRUNAK, S .
JOURNAL OF MOLECULAR BIOLOGY, 1992, 227 (01) :108-113
[7]   CIS-ACTING SEQUENCES INVOLVED IN EXON SELECTION IN THE CHICKEN BETA-TROPOMYOSIN GENE [J].
GALLEGO, ME ;
BALVAY, L ;
BRODY, E .
MOLECULAR AND CELLULAR BIOLOGY, 1992, 12 (12) :5415-5425
[8]   A PROTEIN FACTOR, ASF, CONTROLS CELL-SPECIFIC ALTERNATIVE SPLICING OF SV40 EARLY PRE-MESSENGER-RNA INVITRO [J].
GE, H ;
MANLEY, JL .
CELL, 1990, 62 (01) :25-34
[9]   SEX-SPECIFIC SPLICING AND POLYADENYLATION OF DSX PRE-MESSENGER-RNA REQUIRES A SEQUENCE THAT BINDS SPECIFICALLY TO TRA-2 PROTEIN INVITRO [J].
HEDLEY, ML ;
MANIATIS, T .
CELL, 1991, 65 (04) :579-586
[10]   GENETIC AND BIOCHEMICAL-ANALYSIS OF ALTERNATIVE RNA SPLICING [J].
HODGES, D ;
BERNSTEIN, SI .
ADVANCES IN GENETICS, VOL 31, 1994, 31 :207-281