Updating the CTD Story: From Tail to Epic

被引:30
作者
Bartkowiak, Bartlomiej [1 ]
MacKellar, April L. [1 ]
Greenleaf, Arno L. [1 ]
机构
[1] Duke Univ, Med Ctr, Ctr RNA Biol, Dept Biochem, Durham, NC 27710 USA
关键词
D O I
10.4061/2011/623718
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 [生物化学与分子生物学]; 081704 [应用化学];
摘要
Eukaryotic RNA polymerase II (RNAPII) not only synthesizes mRNA but also coordinates transcription-related processes via its unique C-terminal repeat domain (CTD). The CTD is an RNAPII-specific protein segment consisting of repeating heptads with the consensus sequence Y1S2P3T4S5P6S7 that has been shown to be extensively post-transcriptionally modified in a coordinated, but complicated, manner. Recent discoveries of new modifications, kinases, and binding proteins have challenged previously established paradigms. In this paper, we examine results and implications of recent studies related to modifications of the CTD and the respective enzymes; we also survey characterizations of new CTD-binding proteins and their associated processes and new information regarding known CTD-binding proteins. Finally, we bring into focus new results that identify two additional CTD-associated processes: nucleocytoplasmic transport of mRNA and DNA damage and repair.
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页数:16
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共 181 条
[1]
The connection between transcription and genomic instability [J].
Aguilera, A .
EMBO JOURNAL, 2002, 21 (03) :195-201
[2]
Ctk1 promotes dissociation of basal transcription factors from elongating RNA polymerase II [J].
Ahn, Seong Hoon ;
Keogh, Michael-Christopher ;
Buratowski, Stephen .
EMBO JOURNAL, 2009, 28 (03) :205-212
[3]
Phosphorylation of serine 2 within the RNA polymerase IIC-terminal domain couples transcription and 3′ end processing [J].
Ahn, SH ;
Kim, M ;
Buratowski, S .
MOLECULAR CELL, 2004, 13 (01) :67-76
[4]
TFIIH Kinase Places Bivalent Marks on the Carboxy-Terminal Domain of RNA Polymerase II [J].
Akhtar, Md. Sohail ;
Heidemann, Martin ;
Tietjen, Joshua R. ;
Zhang, David W. ;
Chapman, Rob D. ;
Eick, Dirk ;
Ansari, Aseem Z. .
MOLECULAR CELL, 2009, 34 (03) :387-393
[5]
TFIIH is negatively regulated by cdk8-containing mediator complexes [J].
Akoulitchev, S ;
Chuikov, S ;
Reinberg, D .
NATURE, 2000, 407 (6800) :102-106
[6]
THE C-TERMINAL DOMAIN OF THE LARGEST SUBUNIT OF RNA POLYMERASE-II OF SACCHAROMYCES-CEREVISIAE, DROSOPHILA-MELANOGASTER, AND MAMMALS - A CONSERVED STRUCTURE WITH AN ESSENTIAL FUNCTION [J].
ALLISON, LA ;
WONG, JKC ;
FITZPATRICK, VD ;
MOYLE, M ;
INGLES, CJ .
MOLECULAR AND CELLULAR BIOLOGY, 1988, 8 (01) :321-329
[7]
Control of alternative splicing through siRNA-mediated transcriptional gene silencing [J].
Allo, Mariano ;
Buggiano, Valeria ;
Fededa, Juan P. ;
Petrillo, Ezequiel ;
Schor, Ignacio ;
de la Mata, Manuel ;
Agirre, Eneritz ;
Plass, Mireya ;
Eyras, Eduardo ;
Abou Elela, Sherif ;
Klinck, Roscoe ;
Chabot, Benoit ;
Kornblihtt, Alberto R. .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2009, 16 (07) :717-U43
[8]
A RECQ5-RNA polymerase II association identified by targeted proteomic analysis of human chromatin [J].
Aygun, Ozan ;
Svejstrup, Jesper ;
Liu, Yilun .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (25) :8580-8584
[9]
Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II [J].
Baillat, D ;
Hakimi, MA ;
Näär, AM ;
Shilatifard, A ;
Cooch, N ;
Shiekhattar, R .
CELL, 2005, 123 (02) :265-276
[10]
Cleavage/polyadenylation factor IA associates with the carboxyl-terminal domain of RNA polymerase II in Saccharomyces cerevisiae [J].
Barillà, D ;
Lee, BA ;
Proudfoot, NJ .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2001, 98 (02) :445-450