HYPERVARIABLE REGIONS IN THE PUTATIVE GLYCOPROTEIN OF HEPATITIS-C VIRUS

被引:309
作者
HIJIKATA, M
KATO, N
OOTSUYAMA, Y
NAKAGAWA, M
OHKOSHI, S
SHIMOTOHNO, K
机构
[1] Virology Division, National Cancer Center Research Institute, Chuo-ku, Tokyo, 104, 5-1-1, Tsukiji
关键词
D O I
10.1016/S0006-291X(05)81223-9
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A comparison of the sequences of the putative glycoprotein region in three independent cDNA clones of hepatitis C virus and of sequences of four other clones revealed extensive genetic variation clustered and interspersed with highly conserved amino acid sequences. We obtained evidence for two hypervariable regions in the putative envelope glycoprotein, one region was assumed to be a potential antigenic site, as deduced from the hydrophilicity and analyses of secondary structures. These observations suggest the existence of a large pool of antigenic variants of hepatitis C virus, in Japan. © 1991 Academic Press, Inc.
引用
收藏
页码:220 / 228
页数:9
相关论文
共 25 条
  • [1] GENETIC-VARIABILITY OF THE AIDS VIRUS - NUCLEOTIDE-SEQUENCE ANALYSIS OF 2 ISOLATES FROM AFRICAN PATIENTS
    ALIZON, M
    WAINHOBSON, S
    MONTAGNIER, L
    SONIGO, P
    [J]. CELL, 1986, 46 (01) : 63 - 74
  • [2] ISOLATION OF A CDNA CLONE DERIVED FROM A BLOOD-BORNE NON-A, NON-B VIRAL-HEPATITIS GENOME
    CHOO, QL
    KUO, G
    WEINER, AJ
    OVERBY, LR
    BRADLEY, DW
    HOUGHTON, M
    [J]. SCIENCE, 1989, 244 (4902) : 359 - 362
  • [3] PREDICTION OF PROTEIN CONFORMATION
    CHOU, PY
    FASMAN, GD
    [J]. BIOCHEMISTRY, 1974, 13 (02) : 222 - 245
  • [4] GENOMIC CHANGES ASSOCIATED WITH ANTIGENIC VARIATION OF VISNA VIRUS DURING PERSISTENT INFECTION
    CLEMENTS, JE
    PEDERSEN, FS
    NARAYAN, O
    HASELTINE, WA
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1980, 77 (08): : 4454 - 4458
  • [5] LOCALIZATION AND SYNTHESIS OF AN ANTIGENIC DETERMINANT OF HERPES-SIMPLEX VIRUS GLYCOPROTEIN-D THAT STIMULATES THE PRODUCTION OF NEUTRALIZING ANTIBODY
    COHEN, GH
    DIETZSCHOLD, B
    DELEON, MP
    LONG, D
    GOLUB, E
    VARRICHIO, A
    PEREIRA, L
    EISENBERG, RJ
    [J]. JOURNAL OF VIROLOGY, 1984, 49 (01) : 102 - 108
  • [6] LOCALIZATION OF EPITOPES OF HERPES-SIMPLEX VIRUS TYPE-1 GLYCOPROTEIN-D
    EISENBERG, RJ
    LONG, D
    DELEON, MP
    MATTHEWS, JT
    SPEAR, PG
    GIBSON, MG
    LASKY, LA
    BERMAN, P
    GOLUB, E
    COHEN, GH
    [J]. JOURNAL OF VIROLOGY, 1985, 53 (02) : 634 - 644
  • [7] UNIDIRECTIONAL DIGESTION WITH EXONUCLEASE-III CREATES TARGETED BREAKPOINTS FOR DNA SEQUENCING
    HENIKOFF, S
    [J]. GENE, 1984, 28 (03) : 351 - 359
  • [8] HIJIKATA M, 1990, JAPAN J CANCER RES, V81, P1191
  • [9] PREDICTION OF PROTEIN ANTIGENIC DETERMINANTS FROM AMINO-ACID-SEQUENCES
    HOPP, TP
    WOODS, KR
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1981, 78 (06): : 3824 - 3828
  • [10] MOLECULAR-CLONING OF THE HUMAN HEPATITIS-C VIRUS GENOME FROM JAPANESE PATIENTS WITH NON-A, NON-B HEPATITIS
    KATO, N
    HIJIKATA, M
    OOTSUYAMA, Y
    NAKAGAWA, M
    OHKOSHI, S
    SUGIMURA, T
    SHIMOTOHNO, K
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1990, 87 (24) : 9524 - 9528