THE SEQUENCE OF A 22.4-KB DNA FRAGMENT FROM THE LEFT ARM OF YEAST CHROMOSOME-II REVEALS HOMOLOGS TO BACTERIAL PROLINE SYNTHETASE AND MURINE ALPHA-ADAPTIN, AS WELL AS A NEW PERMEASE AND A DNA-BINDING PROTEIN

被引:13
作者
DEWERGIFOSSE, P
JACQUES, B
JONNIAUX, JL
PURNELLE, B
SKALA, J
GOFFEAU, A
机构
[1] UNIV CATHOLIQUE LOUVAIN, UNITE BIOCHIM PHYSIOL, B-1348 LOUVAIN, BELGIUM
[2] UNIV WROCLAW, INST MICROBIOL, PL-51148 WROCLAW, POLAND
关键词
ALPHA-ADAPTIN; CHROMOSOME II; COR1; DAL4; ERD2; FUR4; PROLINE SYNTHETASE; PRS3; RIBOSOMAL PROTEIN L16; SACCHAROMYCES CEREVISIAE; YEAST;
D O I
10.1002/yea.320101113
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
We report the sequencing of a 22 470 bp DNA fragment from the left arm of Saccharomyces cerevisiae chromosome II. Thirteen open reading frames longer than 300 bp provisionally called YBL0520, YBL0401 to YBL0408 and YBL0410 to YBL0413 have been detected. Five genes were previously sequenced: COR1, encoding a core protein of the mitochondrial coenzyme QH(2) cytochrome c reductase complex (Tzagaloff and Crivellone, 1986), PRS3, a proteasome subunit gene (Lee et al., 1992), ERD2, coding for a protein involved in the secretory pathway (Semeza et al., 1990), URA7, which encodes a CTP synthetase (Ozier-Kalogeropoulos et al., 1991) and the gene for the ribosomal protein L16 (Pan et al., 1993). Among the others, YBL0406 shows striking homologies to FUR4 (Jund et al., 1988) and DAL4 (Yoo et al., 1992), the uracyl and allantoin permeases; YBL0520 is a DNA-related protein, possibly involved in gene regulation; YBL0412 shares homologies with the mouse alpha-adaptins A and C; and YBL0413 is homologous to a protein of Pseudomonas aeruginosa that is likely to be involved in proline biosynthesis. YBL0401, internal to YBL0520, is probably not expressed. The sequence has been deposited in the EMBL data library under accession number X78217
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收藏
页码:1489 / 1496
页数:8
相关论文
共 29 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]   DIMERS, LEUCINE ZIPPERS AND DNA-BINDING DOMAINS [J].
BUSCH, SJ ;
SASSONECORSI, P .
TRENDS IN GENETICS, 1990, 6 (02) :36-40
[3]   A SEQUENCE ASSEMBLY AND EDITING PROGRAM FOR EFFICIENT MANAGEMENT OF LARGE PROJECTS [J].
DEAR, S ;
STADEN, R .
NUCLEIC ACIDS RESEARCH, 1991, 19 (14) :3907-3911
[4]   EPS15, A NOVEL TYROSINE KINASE SUBSTRATE, EXHIBITS TRANSFORMING ACTIVITY [J].
FAZIOLI, F ;
MINICHIELLO, L ;
MATOSKOVA, B ;
WONG, WT ;
DIFIORE, PP .
MOLECULAR AND CELLULAR BIOLOGY, 1993, 13 (09) :5814-5828
[5]   RECOGNITION OF PROTEIN CODING REGIONS IN DNA-SEQUENCES [J].
FICKETT, JW .
NUCLEIC ACIDS RESEARCH, 1982, 10 (17) :5303-5318
[6]   ANALYSIS OF ACCURACY AND IMPLICATIONS OF SIMPLE METHODS FOR PREDICTING SECONDARY STRUCTURE OF GLOBULAR PROTEINS [J].
GARNIER, J ;
OSGUTHORPE, DJ ;
ROBSON, B .
JOURNAL OF MOLECULAR BIOLOGY, 1978, 120 (01) :97-120
[7]   MUTATIONS OF PHOSPHORYLATION SITES IN LAMIN-A THAT PREVENT NUCLEAR LAMINA DISASSEMBLY IN MITOSIS [J].
HEALD, R ;
MCKEON, F .
CELL, 1990, 61 (04) :579-589
[8]  
HOHN B, 1980, GENETIC ENG, V2, P169
[9]   PRIMARY STRUCTURE OF THE URACIL TRANSPORT PROTEIN OF SACCHAROMYCES-CEREVISIAE [J].
JUND, R ;
WEBER, E ;
CHEVALLIER, MR .
EUROPEAN JOURNAL OF BIOCHEMISTRY, 1988, 171 (1-2) :417-424
[10]   THE DETECTION AND CLASSIFICATION OF MEMBRANE-SPANNING PROTEINS [J].
KLEIN, P ;
KANEHISA, M ;
DELISI, C .
BIOCHIMICA ET BIOPHYSICA ACTA, 1985, 815 (03) :468-476