TEMPERATURE-DEPENDENT MOLECULAR-DYNAMICS AND RESTRAINED X-RAY REFINEMENT SIMULATIONS OF A Z-DNA HEXAMER

被引:18
作者
WESTHOF, E [1 ]
CHEVRIER, B [1 ]
GALLION, SL [1 ]
WEINER, PK [1 ]
LEVY, RM [1 ]
机构
[1] RUTGERS STATE UNIV, DEPT CHEM, NEW BRUNSWICK, NJ 08903 USA
关键词
D O I
10.1016/0022-2836(86)90454-7
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:699 / 712
页数:14
相关论文
共 46 条
[31]   SALT-DEPENDENT DYNAMIC STRUCTURE OF POLY(DG-DC) . POLY(DG-DC) [J].
RAMSTEIN, J ;
LENG, M .
NATURE, 1980, 288 (5789) :413-414
[32]   EXACT METHOD FOR THE CALCULATION OF PSEUDOROTATION PARAMETERS P, TAU-M AND THEIR ERRORS - A COMPARISON OF THE ALTONA-SUNDARALINGAM AND CREMER-POPLE TREATMENT OF PUCKERING OF 5-MEMBERED RINGS [J].
RAO, ST ;
WESTHOF, E ;
SUNDARALINGAM, M .
ACTA CRYSTALLOGRAPHICA SECTION A, 1981, 37 (MAY) :421-425
[33]   CRYSTALLINE A-DNA - THE X-RAY-ANALYSIS OF THE FRAGMENT D(G-G-T-A-T-A-C-C) [J].
SHAKKED, Z ;
RABINOVICH, D ;
CRUSE, WBT ;
EGERT, E ;
KENNARD, O ;
SALA, G ;
SALISBURY, SA ;
VISWAMITRA, MA .
PROCEEDINGS OF THE ROYAL SOCIETY SERIES B-BIOLOGICAL SCIENCES, 1981, 213 (1193) :479-487
[34]   MOLECULAR-DYNAMICS SIMULATIONS OF D(C-G-C-G-A).D(T-C-G-C-G) WITH AND WITHOUT HYDRATED COUNTERIONS [J].
SINGH, UC ;
WEINER, SJ ;
KOLLMAN, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1985, 82 (03) :755-759
[35]   STEREOCHEMISTRY OF NUCLEIC ACIDS AND THEIR CONSTITUENTS .4. ALLOWED AND PREFERRED CONFORMATIONS OF NUCLEOSIDES, NUCLEOSIDE MONO-, DI-, TRI-, TETRAPHOSPHATES, NUCLEIC ACIDS AND POLYNUCLEOTIDES [J].
SUNDARAL.M .
BIOPOLYMERS, 1969, 7 (06) :821-&
[36]   THE REACTIVITY OF ANTI-PEPTIDE ANTIBODIES IS A FUNCTION OF THE ATOMIC MOBILITY OF SITES IN A PROTEIN [J].
TAINER, JA ;
GETZOFF, ED ;
ALEXANDER, H ;
HOUGHTEN, RA ;
OLSON, AJ ;
LERNER, RA ;
HENDRICKSON, WA .
NATURE, 1984, 312 (5990) :127-134
[37]   DYNAMICS OF DNA OLIGOMERS [J].
TIDOR, B ;
IRIKURA, KK ;
BROOKS, BR ;
KARPLUS, M .
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 1983, 1 (01) :231-252
[38]   ON THE DISORDERED ACTIVATION DOMAIN IN TRYPSINOGEN - CHEMICAL LABELING AND LOW-TEMPERATURE CRYSTALLOGRAPHY [J].
WALTER, J ;
STEIGEMANN, W ;
SINGH, TP ;
BARTUNIK, H ;
BODE, W ;
HUBER, R .
ACTA CRYSTALLOGRAPHICA SECTION B-STRUCTURAL SCIENCE, 1982, 38 (MAY) :1462-1472
[39]   MOLECULAR-STRUCTURE OF A LEFT-HANDED DOUBLE HELICAL DNA FRAGMENT AT ATOMIC RESOLUTION [J].
WANG, AHJ ;
QUIGLEY, GJ ;
KOLPAK, FJ ;
CRAWFORD, JL ;
VANBOOM, JH ;
VANDERMAREL, G ;
RICH, A .
NATURE, 1979, 282 (5740) :680-686
[40]   AMBER - ASSISTED MODEL-BUILDING WITH ENERGY REFINEMENT - A GENERAL PROGRAM FOR MODELING MOLECULES AND THEIR INTERACTIONS [J].
WEINER, PK ;
KOLLMAN, PA .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1981, 2 (03) :287-303