THE EXON TRAPPING ASSAY PARTLY DISCRIMINATES AGAINST ALTERNATIVELY SPLICED EXONS

被引:22
作者
ANDREADIS, A
NISSON, PE
KOSIK, KS
WATKINS, PC
机构
[1] BRIGHAM & WOMENS HOSP, DEPT MED, DIV NEUROL, CTR NEUROL DIS, BOSTON, MA 02115 USA
[2] GIBCO BRL LIFE TECHNOL INC, GAITHERSBURG, MD 20898 USA
关键词
D O I
10.1093/nar/21.9.2217
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
A cosmid containing eight exons of the gene coding for the microtubule-associated tau protein was subjected to the exon trapping assay. All the constitutive exons contained in the cosmid (4, 5, 7 and 9) were efficiently captured regardless of size. Of the four alternatively spliced exons, three (3, 4A and 8) were not isolated by the assay, but the behavior of exon 6 depended on the identity of its flanking exons.
引用
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页码:2217 / 2221
页数:5
相关论文
共 28 条
[1]   BASIC LOCAL ALIGNMENT SEARCH TOOL [J].
ALTSCHUL, SF ;
GISH, W ;
MILLER, W ;
MYERS, EW ;
LIPMAN, DJ .
JOURNAL OF MOLECULAR BIOLOGY, 1990, 215 (03) :403-410
[2]   STRUCTURE AND NOVEL EXONS OF THE HUMAN-TAU GENE [J].
ANDREADIS, A ;
BROWN, WM ;
KOSIK, KS .
BIOCHEMISTRY, 1992, 31 (43) :10626-10633
[3]   BUFFER GRADIENT GELS AND S-35 LABEL AS AN AID TO RAPID DNA-SEQUENCE DETERMINATION [J].
BIGGIN, MD ;
GIBSON, TJ ;
HONG, GF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1983, 80 (13) :3963-3965
[4]   EXON AMPLIFICATION - A STRATEGY TO ISOLATE MAMMALIAN GENES BASED ON RNA SPLICING [J].
BUCKLER, AJ ;
CHANG, DD ;
GRAW, SL ;
BROOK, JD ;
HABER, DA ;
SHARP, PA ;
HOUSMAN, DE .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1991, 88 (09) :4005-4009
[5]  
CHOMCZYNSKI P, 1987, ANAL BIOCHEM, V162, P156, DOI 10.1016/0003-2697(87)90021-2
[6]   NUCLEOTIDE SUBSTITUTIONS WITHIN THE CARDIAC TROPONIN-T ALTERNATIVE EXON DISRUPT PRE-MESSENGER RNA ALTERNATIVE SPLICING [J].
COOPER, TA ;
ORDAHL, CP .
NUCLEIC ACIDS RESEARCH, 1989, 17 (19) :7905-7921
[7]   PRIMARY STRUCTURE OF HIGH-MOLECULAR-WEIGHT TAU PRESENT IN THE PERIPHERAL NERVOUS-SYSTEM [J].
COUCHIE, D ;
MAVILIA, C ;
GEORGIEFF, IS ;
LIEM, RKH ;
SHELANSKI, ML ;
NUNEZ, J .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1992, 89 (10) :4378-4381
[8]  
CRAXTON M, 1991, Methods (Orlando), V3, P20, DOI 10.1016/S1046-2023(05)80159-8
[9]   A COMPREHENSIVE SET OF SEQUENCE-ANALYSIS PROGRAMS FOR THE VAX [J].
DEVEREUX, J ;
HAEBERLI, P ;
SMITHIES, O .
NUCLEIC ACIDS RESEARCH, 1984, 12 (01) :387-395
[10]   MYOSIN LIGHT-CHAIN 1/3 GENE ALTERNATIVE SPLICING - CIS REGULATION IS BASED UPON A HIERARCHICAL COMPATIBILITY BETWEEN SPLICE SITES [J].
GALLEGO, ME ;
NADALGINARD, B .
MOLECULAR AND CELLULAR BIOLOGY, 1990, 10 (05) :2133-2144