INTERRELATION BETWEEN ELECTROSTATIC AND LIPOPHILICITY POTENTIALS ON MOLECULAR-SURFACES

被引:14
作者
ROZAS, I
DU, QS
ARTECA, GA
机构
[1] LAURENTIAN UNIV,DEPT CHIM & BIOCHIM,SUDBURY,ON P3E 2C6,CANADA
[2] QUEENS UNIV,DEPT CHEM,KINGSTON,ON K7L 3N6,CANADA
[3] CSIC,INST QUIM MED,E-28006 MADRID,SPAIN
来源
JOURNAL OF MOLECULAR GRAPHICS | 1995年 / 13卷 / 02期
基金
加拿大自然科学与工程研究理事会;
关键词
D O I
10.1016/0263-7855(94)00017-M
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Molecular electrostatics and lipophilicity are two important properties included in quantitative structure-activity relationships (QSARs) employed for rational drug design. The molecular electrostatic potential (MEP) provides information on the position, distribution, and extent of electrophilic and nucleophilic regions around a molecule. Similarly, the solvent affinity can be represented by a local phenomenological potential of semiempirical nature: the molecular lipophilicity potential (MLP). Although a simultaneous, three-dimensional display of MEP and MLP is possible, it may not provide a practical tool for comparing molecules. In this work, we deal with the simpler two-dimensional maps of the entire molecular surface projected onto an MEP-MLP plane. We analyze how these maps change with the following factors: (1) composition and molecular geometry, (2) the quality of the computation of MEP, and (3) the parameter set used for evaluating the lipophilicity potential. The approach is used to compare series of pyrazole derivatives. The methodology is useful in assessing molecular similarity, as well as in establishing the nature of differences between compounds.
引用
收藏
页码:98 / 108
页数:11
相关论文
共 32 条
[21]   ATOM BASED PARAMETRIZATION FOR A CONFORMATIONALLY DEPENDENT HYDROPHOBIC INDEX [J].
KANTOLA, A ;
VILLAR, HO ;
LOEW, GH .
JOURNAL OF COMPUTATIONAL CHEMISTRY, 1991, 12 (06) :681-689
[22]   REAL-TIME COLOR GRAPHICS IN STUDIES OF MOLECULAR-INTERACTIONS [J].
LANGRIDGE, R ;
FERRIN, TE ;
KUNTZ, ID ;
CONNOLLY, ML .
SCIENCE, 1981, 211 (4483) :661-666
[23]  
MEZEY PG, 1990, REV COMPUTATIONAL CH, V1
[24]  
REKKER RF, 1979, EUR J MED CHEM, V14, P479
[25]  
Rekker RF., 1977, HYDROPHOBIC FRAGMENT
[26]   AREAS, VOLUMES, PACKING, AND PROTEIN-STRUCTURE [J].
RICHARDS, FM .
ANNUAL REVIEW OF BIOPHYSICS AND BIOENGINEERING, 1977, 6 :151-176
[27]  
Richards W. G., 1983, QUANTUM PHARM
[28]  
ROZAS I, 1991, INT J QUANTUM CHEM Q, V18, P269
[29]  
SINGH UC, 1982, QCPE B, V117
[30]  
Tanford C., 1973, HYDROPHOBIC EFFECT